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Record W2388751865

ADVANCES IN PHYLOGENETIC CHRONOLOGY

2009· article· en· W2388751865 on OpenAlexaff
Qun Yang

Bibliographic record

VenueGushengwu xuebao · 2009
Typearticle
Languageen
FieldEarth and Planetary Sciences
TopicEvolution and Paleontology Studies
Canadian institutionsUniversity of Ottawa
Fundersnot available
KeywordsMolecular clockContext (archaeology)Phylogenetic treeChronologyPaleontologyEarth historyEvolutionary biologyBiologyEcologyPhylogenetics
DOInot available

Abstract

fetched live from OpenAlex

Phylogenetic chronology,or phylochronology,has become an active research area in evolutionary biology.With phylogenetic divergence dates established for the evolutionary history,the biotic evolution and the phylogenetic steps may be comprehended in the context of the physical environmental changes during the earth history.It is emphasized herein that the integrative approach of fossil dates and the relaxed molecular clock techniques would yield a better picture of the evolutionary timescale or a more precise and more accurate phylochronograms for organism groups than if only fossil dates or only molecular timescales are considered.A consensus timescale with both molecular dates and fossil constraints is preferred and,furthermore,an interpretation for the evolutionary schemes thus established should be done in the context of the geological backgrounds;in other words,the evolutionary timescale is laid out as the timeframe for the coevolutionary history between life and the Earth's physical environment.We present recent development in molecular dating techniques based on the relaxed molecular clock concept and strategies in fossil calibration.Examples in recent development of animal phylochronology and estimation of the dates of early invertebrate animal landing are discussed with the integration of fossil dates,molecular chronology,and geological backgrounds.We stress the importance of fossil dates as the foundation for phylochronology and geological background as probable mechanisms for phylogenetic divergences or radiations.

Fetched live from OpenAlex and de-inverted. Abstracts are not stored in this database: the inverted indexes are 8.6 GB of the frame’s 9.3 GB of text, and the host has 13 GB free.

How this classification was reachedexpand

Full frame machine prediction

Teacher imitation

Not calibrated prevalence, not ground truth. Human validation pending. The Gemma side is a direct model label for every work in the frame, read from the title-only record. The Codex side is a classifier learned from the 10,348 direct Codex labels and calibrated to design-weighted sample rates; fields without enough sample support carry no Codex call. Candidate is the union of the two sides; consensus is their intersection. These outputs are machine_predicted_unvalidated and are not human labels.

metaresearch head score (Codex)0.016
metaresearch head score (Gemma)0.037
Version: metacan-v3-hybrid-931329e0061cValidation status: machine_predicted_unvalidated
Candidate categoriesnone
Consensus categoriesnone
DomainCandidate signal: none · Consensus signal: none
Study designCandidate signal: Theoretical or conceptual · Consensus signal: Theoretical or conceptual
GenreCandidate signal: Review · Consensus signal: none
Teacher disagreement score0.016
Threshold uncertainty score0.086

Distilled classifier scores by category (both heads)

CategoryCodexGemma
Metaresearch0.0160.037
Meta-epidemiology (narrow)0.0010.001
Meta-epidemiology (broad)0.0010.001
Bibliometrics0.0090.013
Science and technology studies0.0020.005
Scholarly communication0.0050.011
Open science0.0020.003
Research integrity0.0010.004
Insufficient payload (model declined to judge)0.0080.002

Machine scores (provisional)

The two teacher heads of the student model, read on this work. A score orders the frame for review; it never asserts a category, and the validation status ships verbatim with every row.

Baseline scores from an immature model (maturity gate not passed, 7 training rounds). Scores rank; they never assert a category.

Opus teacher head0.009
GPT teacher head0.229
Teacher spread0.220 · how far apart the two teachers sit on this one work
Validation statusscore_only:v0-immature-baseline · verbatim from the scoring run: score_only means the number may rank works, and no category label ships from it

Classification

machine, unvalidated

Machine predicted; a candidate call from one source (direct Gemma or distilled Codex), not a consensus.

The models applied no category: nothing in the taxonomy fit this work.
Study designTheoretical or conceptual
Domainnot available
GenreReview

How this classification was reached, model by model and score by score, is at the end of the page under "How this classification was reached".

Quick stats

Citations1
Published2009
Admission routes1
Has abstractyes

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