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Record W2419175479 · doi:10.1385/1-59259-194-9:117

Polymerase Chain Reaction-Mediated Mutagenesis in Sequences Resistant to Homogeneous Amplification

2002· article· en· W2419175479 on OpenAlexaff
Ross N. Nazar, Priyanka D. Abeyrathne, Robert V. Intine

Bibliographic record

VenueHumana Press eBooks · 2002
Typearticle
Languageen
FieldBiochemistry, Genetics and Molecular Biology
TopicRNA and protein synthesis mechanisms
Canadian institutionsUniversity of Guelph
Fundersnot available
KeywordsApplications of PCRPolymerase chain reactionMutagenesisMultiple displacement amplificationComputational biologyDNAMutantInverse polymerase chain reactionBiologyPolymeraseGeneticsMolecular biologyGeneDigital polymerase chain reactionMultiplex polymerase chain reactionDNA extraction

Abstract

fetched live from OpenAlex

For many biologists, the polymerase chain reaction (PCR) has become an indispensable tool serving many diverse applications, from simple DNA amplification to complex diagnostics. In basic research, a very important application has been the use of PCR in the introduction of site-specific mutations into target DNA ( 1 , 2 ). A simple and commonly used example of this approach is the two-step “megaprimer” method Fig. 1 ), in which the mutant oligomer is first incorporated into DNA in one direction, then this DNA itself is used as a megaprimer to complete the mutant sequence in the other direction (3). Over the years, such an approach has been used in many laboratories with considerable success. In the authors’ experiments, this approach has been used for over a decade to introduce many changes into the ribosomal genes of yeast cells ( 4 – 6 ). Although some modifications were made some modifications in the amplification conditions ( 7 ), to improve the efficiency of the megaprimer method, the basic strategy, as originally described, has proven to be effective and reliable in most instances. Overview of the two-step megaprimer method for PCR-mediated mutagenesis. These keywords were added by machine and not by the authors. This process is experimental and the keywords may be updated as the learning algorithm improves.

Fetched live from OpenAlex and de-inverted. Abstracts are not stored in this database: the inverted indexes are 8.6 GB of the frame’s 9.3 GB of text, and the host has 13 GB free.

How this classification was reachedexpand

Full frame machine prediction

Teacher imitation

Not calibrated prevalence, not ground truth. Human validation pending. The Gemma side is a direct model label for every work in the frame, read from the title-only record. The Codex side is a classifier learned from the 10,348 direct Codex labels and calibrated to design-weighted sample rates; fields without enough sample support carry no Codex call. Candidate is the union of the two sides; consensus is their intersection. These outputs are machine_predicted_unvalidated and are not human labels.

metaresearch head score (Codex)0.003
metaresearch head score (Gemma)0.002
Version: metacan-v3-hybrid-931329e0061cValidation status: machine_predicted_unvalidated
Candidate categoriesnone
Consensus categoriesnone
DomainCandidate signal: none · Consensus signal: none
Study designCandidate signal: Bench or experimental · Consensus signal: Bench or experimental
GenreCandidate signal: Methods · Consensus signal: Methods
Teacher disagreement score0.004
Threshold uncertainty score0.016

Distilled classifier scores by category (both heads)

CategoryCodexGemma
Metaresearch0.0030.002
Meta-epidemiology (narrow)0.0020.001
Meta-epidemiology (broad)0.0020.001
Bibliometrics0.0010.001
Science and technology studies0.0010.001
Scholarly communication0.0010.001
Open science0.0020.001
Research integrity0.0010.003
Insufficient payload (model declined to judge)0.0040.007

Machine scores (provisional)

The two teacher heads of the student model, read on this work. A score orders the frame for review; it never asserts a category, and the validation status ships verbatim with every row.

Baseline scores from an immature model (maturity gate not passed, 7 training rounds). Scores rank; they never assert a category.

Opus teacher head0.041
GPT teacher head0.250
Teacher spread0.209 · how far apart the two teachers sit on this one work
Validation statusscore_only:v0-immature-baseline · verbatim from the scoring run: score_only means the number may rank works, and no category label ships from it

Classification

machine, unvalidated

Machine predicted; a candidate call from one source (direct Gemma or distilled Codex), not a consensus.

The models applied no category: nothing in the taxonomy fit this work.
Study designBench or experimental
Domainnot available
GenreMethods

How this classification was reached, model by model and score by score, is at the end of the page under "How this classification was reached".

Quick stats

Citations1
Published2002
Admission routes1
Has abstractyes

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