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Record W2419436067 · doi:10.1007/978-1-59745-490-2_11

Enrichment and Disassembly of Ectoplasmic Specializations in the Rat Testis

2007· article· en· W2419436067 on OpenAlexaff
Julian A. Guttman, Kuljeet Vaid, A. Wayne Vogl

Bibliographic record

VenueMethods in molecular biology · 2007
Typearticle
Languageen
FieldMedicine
TopicSperm and Testicular Function
Canadian institutionsCanada's Michael Smith Genome Sciences CentreMichael Smith Health Research BCUniversity of British Columbia
Fundersnot available
KeywordsSertoli cellGelsolinCell biologySpermatogenesisEndoplasmic reticulumBlood–testis barrierBiologyEpitheliumSeminiferous tubuleUltrastructureCell junctionChemistryActinCellAnatomyEndocrinologyBiochemistryGenetics

Abstract

fetched live from OpenAlex

Ectoplasmic specializations are testis specific intercellular adhesion junctions found in Sertoli cells. They are tripartite structures consisting of the plasma membrane of the Sertoli cell, a submembrane layer of actin filaments and an attached cistern of endoplasmic reticulum. Ectoplasmic specializations occur in areas of attachment to spermatids and as part of the basal junction complex between neighboring Sertoli cells. They are functionally related to a number of fundamental events that occur during spermatogenesis, including attachment and then release of developing sperm cells and the translocation of spermatocytes through the blood-testis barrier. The structures may contain viable molecular targets for the development of contraceptives. Here we describe techniques for obtaining, from rat testes, testicular fractions enriched for spermatids with attached ectoplasmic specializations and for disassembling the complexes with gelsolin to obtain supernatants enriched for plaque components. The techniques involve stripping the epithelium from tubule walls, mechanically fragmenting the epithelium, using step sucrose gradients to enrich for spermatids with attached junction plaques, and then incubating with exogenous gelsolin to release plaque components into solution.

Fetched live from OpenAlex and de-inverted. Abstracts are not stored in this database: the inverted indexes are 8.6 GB of the frame’s 9.3 GB of text, and the host has 13 GB free.

How this classification was reachedexpand

Full frame machine prediction

Teacher imitation

Not calibrated prevalence, not ground truth. Human validation pending. The Gemma side is a direct model label for every work in the frame, read from the title-only record. The Codex side is a classifier learned from the 10,348 direct Codex labels and calibrated to design-weighted sample rates; fields without enough sample support carry no Codex call. Candidate is the union of the two sides; consensus is their intersection. These outputs are machine_predicted_unvalidated and are not human labels.

metaresearch head score (Codex)0.000
metaresearch head score (Gemma)0.000
Version: metacan-v3-hybrid-931329e0061cValidation status: machine_predicted_unvalidated
Candidate categoriesnone
Consensus categoriesnone
DomainCandidate signal: none · Consensus signal: none
Study designCandidate signal: Bench or experimental · Consensus signal: Bench or experimental
GenreCandidate signal: Methods · Consensus signal: none
Teacher disagreement score0.002
Threshold uncertainty score0.004

Distilled classifier scores by category (both heads)

CategoryCodexGemma
Metaresearch0.0000.000
Meta-epidemiology (narrow)0.0000.000
Meta-epidemiology (broad)0.0000.000
Bibliometrics0.0010.000
Science and technology studies0.0000.000
Scholarly communication0.0000.000
Open science0.0000.000
Research integrity0.0000.000
Insufficient payload (model declined to judge)0.0010.001

Machine scores (provisional)

The two teacher heads of the student model, read on this work. A score orders the frame for review; it never asserts a category, and the validation status ships verbatim with every row.

Baseline scores from an immature model (maturity gate not passed, 7 training rounds). Scores rank; they never assert a category.

Opus teacher head0.024
GPT teacher head0.395
Teacher spread0.371 · how far apart the two teachers sit on this one work
Validation statusscore_only:v0-immature-baseline · verbatim from the scoring run: score_only means the number may rank works, and no category label ships from it

Classification

machine, unvalidated

Machine predicted; a candidate call from one source (direct Gemma or distilled Codex), not a consensus.

The models applied no category: nothing in the taxonomy fit this work.
Study designBench or experimental
Domainnot available
GenreMethods

How this classification was reached, model by model and score by score, is at the end of the page under "How this classification was reached".

Quick stats

Citations5
Published2007
Admission routes1
Has abstractyes

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