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Record W2429582314 · doi:10.1093/neuonc/now075.46

LG-46INFERIOR OUTCOME AND POOR RESPONSE TO CONVENTIONAL THERAPIES IN PEDIATRIC LOW-GRADE GLIOMAS HARBORING THE BRAF V600E MUTATION

2016· article· en· W2429582314 on OpenAlexaff
Álvaro Lassaletta, Matthew Mistry, Anthony Arnaldo, Scott Ryall, Ana Guerreiro Stücklin, Rahul Krishnatry, Catriona Ling, Marion Honnorat, Nataliya Zhukova, Michal Zápotocký, Tara McKeown, Vijay Ramaswamy, Ute Bartels, Annie Huang, Nada Jabado, Ofelia Cruz, Carmen de Torres, Ho Cherry, Roger J. Packer, Ruth Tatevossian, David W. Ellison, Julie H. Harreld, Jim Dalton, Jean M. Mulcahy Levy, Nicholas K. Foreman, Matthias A. Karajannis, Sabine Mueller, Theodore Nicolaides, David D. Eisenstat, Anne‐Sophie Carret, Mark W. Kieran, Keith L. Ligon, Anne Jouvet, Romain Perbert, Alex Vasiljevic, Didier Frappaz, Marie Joly, Lola Chambeless, Reid C. Thompson, Amulya Nageswara Rao, Aden Ka‐Yin Chan, Ho‐Keung Ng, Maria Luisa Garrè, Paolo Nozza, Maura Massimino, Sarah Leary, Courtney A. Crane, Éric Bouffet, Cynthia Hawkins, Uri Tabori

Bibliographic record

VenueNeuro-Oncology · 2016
Typearticle
Languageen
FieldMedicine
TopicGlioma Diagnosis and Treatment
Canadian institutionsCentre Hospitalier Universitaire Sainte-JustineHospital for Sick Children
Fundersnot available
KeywordsMedicineMutationOncologyCancer researchInternal medicineGeneticsBiologyGene

Abstract

fetched live from OpenAlex

BACKGROUND: Pediatric low-grade gliomas (PLGG) are histologically and clinically diverse and molecular stratification is desperately needed. The BRAF-V600E mutation is highly targetable for therapy but its biological relevance and impact on PLGG outcome is controversial. METHODS: We determined RAS pathway and other secondary mutations in all patients diagnosed with PLGG since 1985 (n = 854 patients biopsied), 506 had sufficient tissue. Tumors were tested for these alterations using the QX200™Droplet Digital™PCR, Nanostring and SNP array technologies. Long-term clinical data and imaging response were collected on all patients. These data were validated on a large international cohort of V600E mutant PLGG. RESULTS: BRAF-V600E mutation was observed in 19 % of PLGG. Mutations were observed across a broad spectrum of histologies including less frequently reported such as pilocytic, pilomyxoid, and diffuse astrocytomas. Importantly, BRAF-V600E positive PLGG were common in midline locations, which are often not biopsied. BRAF-V600E PLGG had inferior long-term outcome when compared with wild-type (WT) cases. Fifteen-year PFS was 7 ± 6% and 64 ± 12% for BRAF-V600E and WT-PLGG respectively (p < 0.05). This translated to OS of 57 ± 16% and 94 ± 6%, respectively (p < 0.05). Secondary molecular alterations stratified BRAF-V600E tumors into low and high-risk tumors (p < 0.05). Specific quantitative imaging analysis revealed response to non-targeted chemotherapy in only 10% BRAF-V600E PLGG, while BRAF-V600E inhibition resulted in a greater response. CONCLUSIONS: In the largest assembled cohort of molecularly characterized pediatric LGG to date, BRAF-V600E mutations identify a unique group of PLGG with distinct biology and survival. Early detection and targeted therapies may transform the management and outcome of these children.

Fetched live from OpenAlex and de-inverted. Abstracts are not stored in this database: the inverted indexes are 8.6 GB of the frame’s 9.3 GB of text, and the host has 13 GB free.

How this classification was reachedexpand

Full frame distilled prediction

Teacher imitation

Not calibrated prevalence, not ground truth. Human validation pending. Learned from the 10,348 direct Codex labels and 10,348 direct Gemma labels. Candidate is the union of thresholded teacher heads; consensus is their intersection. These outputs are machine_predicted_unvalidated and are not human labels or direct frontier model labels.

metaresearch head score (Codex)0.000
metaresearch head score (Gemma)0.001
Version: codex-gemma-dda1882f352aValidation status: machine_predicted_unvalidated
Candidate categoriesnone
Consensus categoriesnone
DomainCandidate signal: none · Consensus signal: none
Study designCandidate signal: Observational · Consensus signal: Observational
GenreCandidate signal: Empirical · Consensus signal: Empirical
Teacher disagreement score0.311
Threshold uncertainty score0.347

Codex and Gemma teacher scores by category

CategoryCodexGemma
Metaresearch0.0000.001
Meta-epidemiology (narrow)0.0000.000
Meta-epidemiology (broad)0.0000.000
Bibliometrics0.0000.000
Science and technology studies0.0000.000
Scholarly communication0.0000.000
Open science0.0000.000
Research integrity0.0000.000
Insufficient payload (model declined to judge)0.0000.000

Machine scores (provisional)

The two teacher heads of the student model, read on this work. A score orders the frame for review; it never asserts a category, and the validation status ships verbatim with every row.

Baseline scores from an immature model (maturity gate not passed, 7 training rounds). Scores rank; they never assert a category.

Opus teacher head0.026
GPT teacher head0.321
Teacher spread0.294 · how far apart the two teachers sit on this one work
Validation statusscore_only:v0-immature-baseline · verbatim from the scoring run: score_only means the number may rank works, and no category label ships from it

Classification

machine, unvalidated

Machine predicted; a candidate call from one teacher head, not a consensus.

The models applied no category: nothing in the taxonomy fit this work.
Study designObservational
Domainnot available
GenreEmpirical

How this classification was reached, model by model and score by score, is at the end of the page under "How this classification was reached".

Quick stats

Citations1
Published2016
Admission routes1
Has abstractyes

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