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Record W2432084722 · doi:10.1093/neuonc/now075.58

LG-58THERAPEUTIC IMPLICATIONS OF MOLECULAR BIOMARKERS IN INFANTS WITH PEDIATRIC LOW-GRADE GLIOMA

2016· article· en· W2432084722 on OpenAlexaffabout
Ana Guerreiro Stücklin, Álvaro Lassaletta, Matthew Mistry, Anthony Arnoldo, Scott Ryall, Catriona Ling, Rahul Krishnatry, Nataliya Zhukova, Michal Zápotocký, Vijay Ramaswamy, Ute Bartels, Annie Huang, Éric Bouffet, Cynthia Hawkins, Uri Tabori

Bibliographic record

VenueNeuro-Oncology · 2016
Typearticle
Languageen
FieldMedicine
TopicGlioma Diagnosis and Treatment
Canadian institutionsUniversity of TorontoHospital for Sick Children
Fundersnot available
KeywordsGliomaMedicineOncologyCancer research

Abstract

fetched live from OpenAlex

BACKGROUND: Pediatric low-grade gliomas (PLGG) are the most common childhood brain tumors, largely driven by alterations of the Ras/BRAF/MAPK pathway. Though considered benign, infants (<3 years of age) have worse survival and significant long-term endocrine, visual and neurological sequelae. The factors that impact outcome of these patients remain poorly understood. METHODS: Retrospective study of all patients diagnosed with PLGG under the age of 3 years at the hospital for Sick Children in Toronto from 1985–2015 (n = 169). Clinical data were ascertained by chart review. PLGG-associated molecular biomarkers (BRAF fusion, FGFR fusion, BRAFV600E mutation) were defined using Nanostring and droplet digital PCR assays. RESULTS: At a median follow-up of 13.12 years (range, 0.14–27.4), fifteen-year overall and progression-free survival for the entire cohort was 88% and 47%, respectively. The main clinical adverse risk factors included age <12 months, midline location and incomplete resection (p < 0.001). Molecular analysis of 74 optic pathway PLGG revealed superior long-term survival for children with NF1 mutations (n = 37) with a 15-year OS of 96% and 66% for NF1 mutated vs WT tumors, respectively (p = 0.01). Strikingly, further analysis of RAS alterations in this group revealed significantly worse outcome for infants with BRAF-V600E mutated PLGG as compared to BRAF-fused or other alterations (p < 0.01). The distinct group of BRAFV600E mutated optic pathway PLGG accounted for one third of non-NF1 patients and was characterized by poor response to chemotherapy. CONCLUSIONS: RAS pathway alterations are frequent and targetable events in infants with optic pathway PLGG.

Fetched live from OpenAlex and de-inverted. Abstracts are not stored in this database: the inverted indexes are 8.6 GB of the frame’s 9.3 GB of text, and the host has 13 GB free.

How this classification was reachedexpand

Full frame machine prediction

Teacher imitation

Not calibrated prevalence, not ground truth. Human validation pending. The Gemma side is a direct model label for every work in the frame, read from the title-only record. The Codex side is a classifier learned from the 10,348 direct Codex labels and calibrated to design-weighted sample rates; fields without enough sample support carry no Codex call. Candidate is the union of the two sides; consensus is their intersection. These outputs are machine_predicted_unvalidated and are not human labels.

metaresearch head score (Codex)0.000
metaresearch head score (Gemma)0.001
Version: metacan-v3-hybrid-931329e0061cValidation status: machine_predicted_unvalidated
Candidate categoriesnone
Consensus categoriesnone
DomainCandidate signal: none · Consensus signal: none
Study designCandidate signal: Not applicable · Consensus signal: none
GenreCandidate signal: Empirical · Consensus signal: Empirical
Teacher disagreement score0.003
Threshold uncertainty score0.006

Distilled classifier scores by category (both heads)

CategoryCodexGemma
Metaresearch0.0000.001
Meta-epidemiology (narrow)0.0000.000
Meta-epidemiology (broad)0.0000.000
Bibliometrics0.0000.000
Science and technology studies0.0000.000
Scholarly communication0.0000.000
Open science0.0000.000
Research integrity0.0000.000
Insufficient payload (model declined to judge)0.0000.000

Machine scores (provisional)

The two teacher heads of the student model, read on this work. A score orders the frame for review; it never asserts a category, and the validation status ships verbatim with every row.

Baseline scores from an immature model (maturity gate not passed, 7 training rounds). Scores rank; they never assert a category.

Opus teacher head0.016
GPT teacher head0.296
Teacher spread0.280 · how far apart the two teachers sit on this one work
Validation statusscore_only:v0-immature-baseline · verbatim from the scoring run: score_only means the number may rank works, and no category label ships from it

Classification

machine, unvalidated

Machine predicted; a candidate call from one source (direct Gemma or distilled Codex), not a consensus.

The models applied no category: nothing in the taxonomy fit this work.
Study designNot applicable
Domainnot available
GenreEmpirical

How this classification was reached, model by model and score by score, is at the end of the page under "How this classification was reached".

Quick stats

Citations0
Published2016
Admission routes2
Has abstractyes

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