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Record W2435059843 · doi:10.1093/neuonc/now075.73

LG-73CHARACTERIZATION OF GANGLIOGLIOMA AS A NEURODEVELOPMENTAL DISORDER

2016· article· en· W2435059843 on OpenAlexaffabout
Qiang Jiang, Jamie Zagozewski, Paolo Nozza, Beverly Wilson, Frank K.H. van Landeghem, David D. Eisenstat

Bibliographic record

VenueNeuro-Oncology · 2016
Typearticle
Languageen
FieldMedicine
TopicVascular Malformations Diagnosis and Treatment
Canadian institutionsUniversity of Alberta
Fundersnot available
KeywordsGangliogliomaNeurodevelopmental disorderMedicinePsychologyNeurosciencePsychiatryEpilepsy

Abstract

fetched live from OpenAlex

INTRODUCTION: Gangliogliomas (GG) are low-grade, well differentiated neuroepithelial tumours of the central nervous system (CNS) comprised of neoplastic glial and neuronal cells. From microarray data, gangliogliomas overexpress the homeobox gene DLX2 required for differentiation and migration of inhibitory interneurons in the embryonic forebrain. We are interested in the role DLX2 plays in specifying neural progenitor fate. We hypothesize that in CNS progenitors, DLX2 regulates neural versus glial cell fate decisions. METHODS: DLX2 expression was examined in a cohort of ganglioglioma FFPE sections using immunohistochemistry and dual immunofluorescence labelling. Co-localization of DLX2 with glial fibrillary acidic protein (GFAP; glial marker) and synaptophysin (neural marker) was carried out. BRAF V600E mutation status was also assessed. RESULTS: In our discovery cohort of 30 patient samples (Instituto Giannina Gaslini), 10 samples expressed DLX2. In our validation cohort of 42 patients (University of Alberta), 6 of 12 tumours examined so far have the V600E mutation. One heavily pretreated patient with progressive cervicomedullary disease has had a very good partial response to BRAF inhibitor therapy. 16 of 26 samples studied to date expressed nuclear DLX2. All 16 DLX2(+) tumours co-expressed GFAP and synaptophysin. CONCLUSIONS: Our results support that GG arise from bipotential CNS progenitors arrested at the neuronal-glial cell fate “decision” point. As an alternative to offering adjunct therapy using chemotherapy and/or radiation for recurrent/progressive disease, biological or differentiation-based treatments could be considered +/- BRAF inhibitors for those GG with or without the V600E mutation, respectively. Correlation of BRAF mutational status and DLX2 expression is in progress.

Fetched live from OpenAlex and de-inverted. Abstracts are not stored in this database: the inverted indexes are 8.6 GB of the frame’s 9.3 GB of text, and the host has 13 GB free.

How this classification was reachedexpand

Full frame machine prediction

Teacher imitation

Not calibrated prevalence, not ground truth. Human validation pending. The Gemma side is a direct model label for every work in the frame, read from the title-only record. The Codex side is a classifier learned from the 10,348 direct Codex labels and calibrated to design-weighted sample rates; fields without enough sample support carry no Codex call. Candidate is the union of the two sides; consensus is their intersection. These outputs are machine_predicted_unvalidated and are not human labels.

metaresearch head score (Codex)0.000
metaresearch head score (Gemma)0.000
Version: metacan-v3-hybrid-931329e0061cValidation status: machine_predicted_unvalidated
Candidate categoriesnone
Consensus categoriesnone
DomainCandidate signal: none · Consensus signal: none
Study designCandidate signal: Observational · Consensus signal: Observational
GenreCandidate signal: Empirical · Consensus signal: Empirical
Teacher disagreement score0.021
Threshold uncertainty score0.043

Distilled classifier scores by category (both heads)

CategoryCodexGemma
Metaresearch0.0000.000
Meta-epidemiology (narrow)0.0010.000
Meta-epidemiology (broad)0.0000.000
Bibliometrics0.0020.002
Science and technology studies0.0000.000
Scholarly communication0.0000.000
Open science0.0000.000
Research integrity0.0000.000
Insufficient payload (model declined to judge)0.0030.001

Machine scores (provisional)

The two teacher heads of the student model, read on this work. A score orders the frame for review; it never asserts a category, and the validation status ships verbatim with every row.

Baseline scores from an immature model (maturity gate not passed, 7 training rounds). Scores rank; they never assert a category.

Opus teacher head0.013
GPT teacher head0.280
Teacher spread0.266 · how far apart the two teachers sit on this one work
Validation statusscore_only:v0-immature-baseline · verbatim from the scoring run: score_only means the number may rank works, and no category label ships from it

Classification

machine, unvalidated

Machine predicted; a candidate call from one source (direct Gemma or distilled Codex), not a consensus.

The models applied no category: nothing in the taxonomy fit this work.
Study designObservational
Domainnot available
GenreEmpirical

How this classification was reached, model by model and score by score, is at the end of the page under "How this classification was reached".

Quick stats

Citations0
Published2016
Admission routes2
Has abstractyes

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