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Record W245439066 · doi:10.17221/6997-cjas

Association of single nucleotide polymorphisms in CAPN1 and CAST genes with beef tenderness from Spanish commercial feedlots

2013· article· en· W245439066 on OpenAlexaff
C. Avilés, M. Juárez, F. Peña, V. Domenech, I. Clemente, A. Molina

Bibliographic record

VenueCzech Journal of Animal Science · 2013
Typearticle
Languageen
FieldAgricultural and Biological Sciences
TopicMeat and Animal Product Quality
Canadian institutionsAgriculture and Agri-Food Canada
Fundersnot available
KeywordsCalpastatinTendernessMeat tendernessBiologySingle-nucleotide polymorphismCrossbreedRaw meatVeterinary medicineAnimal sciencePopulationPolymorphism (computer science)GenotypeGeneticsFood scienceGeneMedicineCalpain

Abstract

fetched live from OpenAlex

Frequencies of two SNPs in the μ-calpain (CAPN1) and calpastatin (CAST) genes in local and foreign commercial cross-breeds used in south-western Spain (Charolais, Limousin, and Retinta) were evaluated and the association of these markers with texture analysis in animals fattened under different feedlot conditions was assessed. Marker frequencies were estimated in a 286 bull crossbred population and the longisimus dorsi muscles from subsequently selected 161 animals were used to measure Warner-Bratzler shear force in raw and cooked samples at three different ageing days (1, 7, and 21). Significant differences (P ≤ 0.05) were found for shear force in raw and cooked meat samples for the three ageing days for the three crossbreeds analyzed. Significant associations were observed for raw meat for the Charolais between shear force and the CAPN1 marker (P = 0.019), as well as between the CAST polymorphism and shear force (P = 0.027) in the Limousin. No associations were found between the markers and shear force in the Retinta (P > 0.05). In contrast, although these markers might be useful in particular selected populations due to their effect on objective texture parameters, no significant association (P > 0.05) was found for cooked meat in the sample of Spanish commercial crossbreeds used in this study. Further studies with a higher number of animals will be necessary to confirm these results.

Fetched live from OpenAlex and de-inverted. Abstracts are not stored in this database: the inverted indexes are 8.6 GB of the frame’s 9.3 GB of text, and the host has 13 GB free.

How this classification was reachedexpand

Full frame distilled prediction

Teacher imitation

Not calibrated prevalence, not ground truth. Human validation pending. Learned from the 10,348 direct Codex labels and 10,348 direct Gemma labels. Candidate is the union of thresholded teacher heads; consensus is their intersection. These outputs are machine_predicted_unvalidated and are not human labels or direct frontier model labels.

metaresearch head score (Codex)0.001
metaresearch head score (Gemma)0.000
Version: codex-gemma-dda1882f352aValidation status: machine_predicted_unvalidated
Candidate categoriesnone
Consensus categoriesnone
DomainCandidate signal: none · Consensus signal: none
Study designCandidate signal: Observational · Consensus signal: none
GenreCandidate signal: Empirical · Consensus signal: Empirical
Teacher disagreement score0.701
Threshold uncertainty score0.377

Codex and Gemma teacher scores by category

CategoryCodexGemma
Metaresearch0.0010.000
Meta-epidemiology (narrow)0.0000.000
Meta-epidemiology (broad)0.0000.000
Bibliometrics0.0000.000
Science and technology studies0.0000.000
Scholarly communication0.0000.001
Open science0.0000.000
Research integrity0.0000.000
Insufficient payload (model declined to judge)0.0000.000

Machine scores (provisional)

The two teacher heads of the student model, read on this work. A score orders the frame for review; it never asserts a category, and the validation status ships verbatim with every row.

Baseline scores from an immature model (maturity gate not passed, 7 training rounds). Scores rank; they never assert a category.

Opus teacher head0.034
GPT teacher head0.235
Teacher spread0.201 · how far apart the two teachers sit on this one work
Validation statusscore_only:v0-immature-baseline · verbatim from the scoring run: score_only means the number may rank works, and no category label ships from it

Classification

machine, unvalidated

Machine predicted; a candidate call from one teacher head, not a consensus.

The models applied no category: nothing in the taxonomy fit this work.
Study designObservational
Domainnot available
GenreEmpirical

How this classification was reached, model by model and score by score, is at the end of the page under "How this classification was reached".

Quick stats

Citations14
Published2013
Admission routes1
Has abstractyes

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