From the wild red jungle fowl to domesticated chickens: modification of eimerian-microbiome-host interactions
Bibliographic record
Abstract
Domestication of chickens from the wild red jungle fowl and modernisation of the poultry industry has changed both poultry and their intestinal microbiome, specifically the eimerian-microbiome-host relationship. Eimeria spp. represent an enteric parasite that has a long co-evolutionary history with their hosts. These parasites have adapted to suit an environment in which chickens thrive and the chickens' intestinal environment, including the changing host microbiome. This review will delve into the changes in eimerian-host interactions with wild red jungle fowl versus domesticated chickens. The changing nature and composition of the intestinal microbiota as it followed the red jungle fowl into domestication and the relationship of this evolving microbiota with coccidia will be explored. Better comprehension of the web of interactions among the evolving eimerian-microbiome-host relationship will allow for the responsible exploitation of these relationships to maximise poultry health and productivity.
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How this classification was reachedexpand
Full frame machine prediction
Teacher imitationNot calibrated prevalence, not ground truth. Human validation pending. The Gemma side is a direct model label for every work in the frame, read from the title-only record. The Codex side is a classifier learned from the 10,348 direct Codex labels and calibrated to design-weighted sample rates; fields without enough sample support carry no Codex call. Candidate is the union of the two sides; consensus is their intersection. These outputs are machine_predicted_unvalidated and are not human labels.
Distilled classifier scores by category (both heads)
| Category | Codex | Gemma |
|---|---|---|
| Metaresearch | 0.000 | 0.000 |
| Meta-epidemiology (narrow) | 0.000 | 0.000 |
| Meta-epidemiology (broad) | 0.000 | 0.000 |
| Bibliometrics | 0.000 | 0.000 |
| Science and technology studies | 0.000 | 0.000 |
| Scholarly communication | 0.001 | 0.000 |
| Open science | 0.000 | 0.000 |
| Research integrity | 0.000 | 0.000 |
| Insufficient payload (model declined to judge) | 0.001 | 0.000 |
Machine scores (provisional)
The two teacher heads of the student model, read on this work. A score orders the frame for review; it never asserts a category, and the validation status ships verbatim with every row.
Baseline scores from an immature model (maturity gate not passed, 7 training rounds). Scores rank; they never assert a category.
score_only:v0-immature-baseline · verbatim from the scoring run: score_only means the number may rank works, and no category label ships from itClassification
machine, unvalidatedMachine predicted; a candidate call from one source (direct Gemma or distilled Codex), not a consensus.
How this classification was reached, model by model and score by score, is at the end of the page under "How this classification was reached".