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Record W2479209046 · doi:10.1021/acs.jpcc.6b05158

Mechanistic Control of the Growth of Three-Dimensional Gold Sensors

2016· article· en· W2479209046 on OpenAlexafffund
Sara Mahshid, Adam Mepham, Sahar Sadat Mahshid, Ian B. Burgess, Tina Saberi Safaei, Edward H. Sargent, Shana O. Kelley

Bibliographic record

VenueThe Journal of Physical Chemistry C · 2016
Typearticle
Languageen
FieldBiochemistry, Genetics and Molecular Biology
TopicAdvanced biosensing and bioanalysis techniques
Canadian institutionsUniversity of Toronto
FundersNatural Sciences and Engineering Research Council of CanadaCanada First Research Excellence FundOntario Ministry of Research, Innovation and ScienceGovernment of CanadaGenome CanadaOntario GenomicsOntario Genomics Institute
KeywordsMicroscale chemistryNucleationOverpotentialNanotechnologyMaterials scienceElectrodeMicroelectronicsMicroelectrodeChemical physicsElectrochemistryChemistry

Abstract

fetched live from OpenAlex

Three-dimensional (3D) electrodes with large surface areas are highly effective biomolecular sensors. These structures can be generated via the electrodeposition of gold inside microscale apertures patterned on the surface of a microelectronic chip. Such electrodes enable the ultrasensitive analysis of nucleic acids, proteins, and small molecules. Since the performance of these electrodes is directly related to their surface area, the ability to control their microscale morphology is critical. Here, we explore an electrochemical model based on the theory of nucleation and growth to better understand how to control the morphology of these electrodes. The insights gained from this model enabled us to create preferential conditions for the formation of different morphological features. We demonstrate for the first time that electrodeposition of 3D nanostructured microelectrodes inside a microscale aperture is governed by two stages of nucleation and growth. The first stage involves the creation of primary nuclei at the bottom of the aperture. The second stage features the generation of new nuclei upon exposure to the bulk solution. Depending on the overpotential, the deposition is then continued by either rapid growth of the original nuclei or fast growth of new nuclei. Faster electrodeposition at high overpotentials promotes directional growth, generating spiky structures. More isotropic growth is observed with low overpotentials, generating rounder features. Ultimately we determine the efficiency of DNA hybridization on a variety of structures and identify the optimal morphologies for rapid DNA–DNA duplex formation.

Fetched live from OpenAlex and de-inverted. Abstracts are not stored in this database: the inverted indexes are 8.6 GB of the frame’s 9.3 GB of text, and the host has 13 GB free.

How this classification was reachedexpand

Full frame machine prediction

Teacher imitation

Not calibrated prevalence, not ground truth. Human validation pending. The Gemma side is a direct model label for every work in the frame, read from the title-only record. The Codex side is a classifier learned from the 10,348 direct Codex labels and calibrated to design-weighted sample rates; fields without enough sample support carry no Codex call. Candidate is the union of the two sides; consensus is their intersection. These outputs are machine_predicted_unvalidated and are not human labels.

metaresearch head score (Codex)0.000
metaresearch head score (Gemma)0.001
Version: metacan-v3-hybrid-931329e0061cValidation status: machine_predicted_unvalidated
Candidate categoriesnone
Consensus categoriesnone
DomainCandidate signal: none · Consensus signal: none
Study designCandidate signal: Bench or experimental · Consensus signal: Bench or experimental
GenreCandidate signal: Empirical · Consensus signal: Empirical
Teacher disagreement score0.001
Threshold uncertainty score0.006

Distilled classifier scores by category (both heads)

CategoryCodexGemma
Metaresearch0.0000.001
Meta-epidemiology (narrow)0.0000.000
Meta-epidemiology (broad)0.0000.000
Bibliometrics0.0000.000
Science and technology studies0.0000.001
Scholarly communication0.0010.000
Open science0.0010.000
Research integrity0.0010.001
Insufficient payload (model declined to judge)0.0010.000

Machine scores (provisional)

The two teacher heads of the student model, read on this work. A score orders the frame for review; it never asserts a category, and the validation status ships verbatim with every row.

Baseline scores from an immature model (maturity gate not passed, 7 training rounds). Scores rank; they never assert a category.

Opus teacher head0.006
GPT teacher head0.228
Teacher spread0.222 · how far apart the two teachers sit on this one work
Validation statusscore_only:v0-immature-baseline · verbatim from the scoring run: score_only means the number may rank works, and no category label ships from it

Classification

machine, unvalidated

Machine predicted; a candidate call from one source (direct Gemma or distilled Codex), not a consensus.

The models applied no category: nothing in the taxonomy fit this work.
Study designBench or experimental
Domainnot available
GenreEmpirical

How this classification was reached, model by model and score by score, is at the end of the page under "How this classification was reached".

Quick stats

Citations51
Published2016
Admission routes2
Has abstractyes

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