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Record W2482921246 · doi:10.1111/tpj.13294

The composition of surface wax on trichomes of <i>Arabidopsis thaliana</i> differs from wax on other epidermal cells

2016· article· en· W2482921246 on OpenAlexafffund
Daniela Hegebarth, Christopher Buschhaus, Wu May, David A. Bird, Reinhard Jetter

Bibliographic record

VenueThe Plant Journal · 2016
Typearticle
Languageen
FieldAgricultural and Biological Sciences
TopicPlant Surface Properties and Treatments
Canadian institutionsMount Royal UniversityUniversity of British Columbia
FundersBritish Columbia Knowledge Development FundNatural Sciences and Engineering Research Council of CanadaCanada Research ChairsCanada Foundation for Innovation
KeywordsTrichomeWaxEpidermis (zoology)MutantBiologyBotanyCuticle (hair)Epicuticular waxPlant cuticleArabidopsisWild typeAbiotic componentGeneBiochemistryGeneticsAnatomyEcology

Abstract

fetched live from OpenAlex

Summary To protect plants against biotic and abiotic stress, the waxy cuticle must coat all epidermis cells. Here, two independent approaches addressed whether cell‐type‐specific differences exist between wax compositions on trichomes and other epidermal cells of Arabidopsis thaliana , possibly with different protection roles. First, the total waxes from a mutant lacking trichomes ( gl1 ) were compared to waxes from wild type and a trichome‐rich mutant ( cpc tcl1 etc1 etc3 ). In the stem wax, compounds with aliphatic chains longer than 31 carbons (derived from C 32 precursors) increased in relative abundance in cpc tcl1 etc1 etc3 over gl1 . Similarly, the leaf wax from the trichome‐rich mutant contained higher amounts of C 32+ compounds as compared to gl1 . Second, leaf trichomes were isolated, and their waxes were analyzed. The wax mixtures of the trichome‐rich mutant and the wild type were similar, comprising alkanes and alkenes as well as branched and unbranched primary alcohols. The direct analyses of trichome waxes confirmed that they contained relatively high concentrations of C 32+ compounds, compared with the pavement cell wax inferred from analysis of gl1 leaves. Finally, the cell‐type‐specific wax compositions were put into perspective with expression patterns of wax biosynthesis genes in trichomes and pavement cells. Analyses of published transcriptome data (Marks et al ., ) revealed that core enzymes involved in elongation of wax precursors to various carbon chain lengths are expressed differentially between epidermis cell types. By combining the chemical and gene expression data, we identified promising gene candidates involved in the formation of C 32+ aliphatic chains.

Fetched live from OpenAlex and de-inverted. Abstracts are not stored in this database: the inverted indexes are 8.6 GB of the frame’s 9.3 GB of text, and the host has 13 GB free.

How this classification was reachedexpand

Full frame distilled prediction

Teacher imitation

Not calibrated prevalence, not ground truth. Human validation pending. Learned from the 10,348 direct Codex labels and 10,348 direct Gemma labels. Candidate is the union of thresholded teacher heads; consensus is their intersection. These outputs are machine_predicted_unvalidated and are not human labels or direct frontier model labels.

metaresearch head score (Codex)0.000
metaresearch head score (Gemma)0.000
Version: codex-gemma-dda1882f352aValidation status: machine_predicted_unvalidated
Candidate categoriesnone
Consensus categoriesnone
DomainCandidate signal: none · Consensus signal: none
Study designCandidate signal: Bench or experimental · Consensus signal: Bench or experimental
GenreCandidate signal: Empirical · Consensus signal: Empirical
Teacher disagreement score0.156
Threshold uncertainty score0.218

Codex and Gemma teacher scores by category

CategoryCodexGemma
Metaresearch0.0000.000
Meta-epidemiology (narrow)0.0000.000
Meta-epidemiology (broad)0.0000.000
Bibliometrics0.0000.000
Science and technology studies0.0000.000
Scholarly communication0.0000.000
Open science0.0000.000
Research integrity0.0000.000
Insufficient payload (model declined to judge)0.0000.000

Machine scores (provisional)

The two teacher heads of the student model, read on this work. A score orders the frame for review; it never asserts a category, and the validation status ships verbatim with every row.

Baseline scores from an immature model (maturity gate not passed, 7 training rounds). Scores rank; they never assert a category.

Opus teacher head0.027
GPT teacher head0.192
Teacher spread0.165 · how far apart the two teachers sit on this one work
Validation statusscore_only:v0-immature-baseline · verbatim from the scoring run: score_only means the number may rank works, and no category label ships from it

Classification

machine, unvalidated

Machine predicted; a candidate call from one teacher head, not a consensus.

The models applied no category: nothing in the taxonomy fit this work.
Study designBench or experimental
Domainnot available
GenreEmpirical

How this classification was reached, model by model and score by score, is at the end of the page under "How this classification was reached".

Quick stats

Citations72
Published2016
Admission routes2
Has abstractyes

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