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Hereditary Spastic Paraplegia Type 4 (SPG4): A Clinico-Genetic Study in a Large Cohort of Patients with Spastic Paraplegia (P5.075)

2016· article· en· W2491975933 on OpenAlexaff
Marzia Mearini, Lucia Pedace, Antonella Casella, Celeste Montecchiani, Fabrizio Gaudiello, Marialuisa Miele, José Luiz Pedroso, Carlo Caltagirone, Roberto Massa, Orlando Graziani Póvoas Barsottini, Renato P. Munhoz, Toshitaka Kawarai, Antonio Orlacchio

Bibliographic record

VenueNeurology · 2016
Typearticle
Languageen
FieldNeuroscience
TopicHereditary Neurological Disorders
Canadian institutionsToronto Western HospitalUniversity of Toronto
Fundersnot available
KeywordsHereditary spastic paraplegiaParaplegiaMedicineSpasticCohortPediatricsPhysical therapyInternal medicineCerebral palsyGeneticsPsychiatrySpinal cordBiologyPhenotype

Abstract

fetched live from OpenAlex

Objective: This study includes the evaluation of a comprehensive spectrum of clinical features and the mutational screening of the SPG4/SPAST gene in patients with hereditary spastic paraplegia (HSP). Background: HSP is a heterogeneous group of neurodegenerative disorders with the characteristics of slowly progressive spasticity and weakness of the lower limbs. Mutations in SPG4/SPAST represent the most frequent molecular etiology, but the worldwide incidence is unknown. Design/Methods: A cohort of 726 patients, 98 sporadic and 628 subjects belonging to 215 families, were recruited from Italian, Brazilian, and Japanese populations in a period from 2008 to 2015. Clinical and instrumental functional analyses consist of neurological assessment and neuroimaging. Mutational screening was carried out by PCR-direct sequencing and multiplex ligation dependent probe amplification. Haplotype studies were performed on three recurrent variants. Results: Our study highlights clinical and epidemiological differences among populations, especially regarding age at onset and disability degree, showing unique genotype-phenotype correlations. Genetic analysis revealed a total of 52 different pathogenic nucleotide changes in 284 HSP patients: 21 sporadic cases and 263 cases from 96 families. Among them, six nucleotide changes were novel and pathogenic. The analysis revealed a great portion of private mutations worldwide and confirmed the founder effect for one recurrent variant in the Italian population. Interestingly, mutations were detected in 21[percnt] of sporadic cases and in a range from 16[percnt] to 100[percnt] of families, depending on the number of affected in the family. Conclusions: This study represents the first worldwide SPG4/SPAST genetic screening on HSP patients. Epidemiological and clinical results broaden the spectrum of the clinical presentations of HSP associated with mutations in SPG4/SPAST. Finally, our findings provide evidence that the chance to detect SPG4/SPAST mutations varies proportionally to the number of affected in the family and is higher in sporadic cases than in families with only two affected.

Fetched live from OpenAlex and de-inverted. Abstracts are not stored in this database: the inverted indexes are 8.6 GB of the frame’s 9.3 GB of text, and the host has 13 GB free.

How this classification was reachedexpand

Full frame distilled prediction

Teacher imitation

Not calibrated prevalence, not ground truth. Human validation pending. Learned from the 10,348 direct Codex labels and 10,348 direct Gemma labels. Candidate is the union of thresholded teacher heads; consensus is their intersection. These outputs are machine_predicted_unvalidated and are not human labels or direct frontier model labels.

metaresearch head score (Codex)0.000
metaresearch head score (Gemma)0.002
Version: codex-gemma-dda1882f352aValidation status: machine_predicted_unvalidated
Candidate categoriesMeta-epidemiology (narrow)
Consensus categoriesnone
DomainCandidate signal: none · Consensus signal: none
Study designCandidate signal: Observational · Consensus signal: Observational
GenreCandidate signal: Empirical · Consensus signal: Empirical
Teacher disagreement score0.016
Threshold uncertainty score1.000

Codex and Gemma teacher scores by category

CategoryCodexGemma
Metaresearch0.0000.002
Meta-epidemiology (narrow)0.0000.000
Meta-epidemiology (broad)0.0010.000
Bibliometrics0.0000.001
Science and technology studies0.0000.001
Scholarly communication0.0000.000
Open science0.0010.000
Research integrity0.0000.001
Insufficient payload (model declined to judge)0.0010.000

Machine scores (provisional)

The two teacher heads of the student model, read on this work. A score orders the frame for review; it never asserts a category, and the validation status ships verbatim with every row.

Baseline scores from an immature model (maturity gate not passed, 7 training rounds). Scores rank; they never assert a category.

Opus teacher head0.022
GPT teacher head0.265
Teacher spread0.243 · how far apart the two teachers sit on this one work
Validation statusscore_only:v0-immature-baseline · verbatim from the scoring run: score_only means the number may rank works, and no category label ships from it

Classification

machine, unvalidated

Machine predicted; a candidate call from one teacher head, not a consensus.

Study designObservational
Domainnot available
GenreEmpirical

How this classification was reached, model by model and score by score, is at the end of the page under "How this classification was reached".

Quick stats

Citations0
Published2016
Admission routes1
Has abstractyes

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