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Record W2509400647 · doi:10.1098/rstb.2015.0356

The roadmap for estimation of cell-type-specific neuronal activity from non-invasive measurements

2016· review· en· W2509400647 on OpenAlexfundno aff
Hana Uhlířová, Kıvılcım Kılıç, Peifang Tian, Sava Sakadžić, Louis Gagnon, Martin Thunemann, Michèle Desjardins, Payam A. Saisan, Krystal Nizar, Mohammad A. Yaseen, Donald J. Hagler, Matthieu Vandenberghe, Srdjan Djurovic, Ole A. Andreassen, Gabriel A. Silva, Eliezer Masliah, David Kleinfeld, Sergei A. Vinogradov, Richard B. Buxton, Gaute T. Einevoll, David A. Boas, Anders M. Dale, Anna Devor

Bibliographic record

VenuePhilosophical Transactions of the Royal Society B Biological Sciences · 2016
Typereview
Languageen
FieldNeuroscience
TopicNeural dynamics and brain function
Canadian institutionsnot available
FundersNational Center for Research ResourcesNational Institute of Biomedical Imaging and BioengineeringNational Institute of Neurological Disorders and StrokeNational Institute on Drug AbuseNatural Sciences and Engineering Research Council of CanadaUniversity of California, San DiegoTürkiye Bilimsel ve Teknolojik Araştırma KurumuNational Institutes of HealthCentral European Institute of TechnologyNational Institute of Mental HealthNational Institute on AgingInternational Headache SocietyDeutsche ForschungsgemeinschaftNorges ForskningsrådMinisterstvo Školství, Mládeže a Tělovýchovy
KeywordsEstimationBiologyNeuroscienceComputer scienceComputational biologyEngineering

Abstract

fetched live from OpenAlex

The computational properties of the human brain arise from an intricate interplay between billions of neurons connected in complex networks. However, our ability to study these networks in healthy human brain is limited by the necessity to use non-invasive technologies. This is in contrast to animal models where a rich, detailed view of cellular-level brain function with cell-type-specific molecular identity has become available due to recent advances in microscopic optical imaging and genetics. Thus, a central challenge facing neuroscience today is leveraging these mechanistic insights from animal studies to accurately draw physiological inferences from non-invasive signals in humans. On the essential path towards this goal is the development of a detailed 'bottom-up' forward model bridging neuronal activity at the level of cell-type-specific populations to non-invasive imaging signals. The general idea is that specific neuronal cell types have identifiable signatures in the way they drive changes in cerebral blood flow, cerebral metabolic rate of O2 (measurable with quantitative functional Magnetic Resonance Imaging), and electrical currents/potentials (measurable with magneto/electroencephalography). This forward model would then provide the 'ground truth' for the development of new tools for tackling the inverse problem-estimation of neuronal activity from multimodal non-invasive imaging data.This article is part of the themed issue 'Interpreting BOLD: a dialogue between cognitive and cellular neuroscience'.

Fetched live from OpenAlex and de-inverted. Abstracts are not stored in this database: the inverted indexes are 8.6 GB of the frame’s 9.3 GB of text, and the host has 13 GB free.

How this classification was reachedexpand

Full frame machine prediction

Teacher imitation

Not calibrated prevalence, not ground truth. Human validation pending. The Gemma side is a direct model label for every work in the frame, read from the title-only record. The Codex side is a classifier learned from the 10,348 direct Codex labels and calibrated to design-weighted sample rates; fields without enough sample support carry no Codex call. Candidate is the union of the two sides; consensus is their intersection. These outputs are machine_predicted_unvalidated and are not human labels.

metaresearch head score (Codex)0.004
metaresearch head score (Gemma)0.004
Version: metacan-v3-hybrid-931329e0061cValidation status: machine_predicted_unvalidated
Candidate categoriesnone
Consensus categoriesnone
DomainCandidate signal: none · Consensus signal: none
Study designCandidate signal: Not applicable · Consensus signal: none
GenreCandidate signal: Review · Consensus signal: Review
Teacher disagreement score0.004
Threshold uncertainty score0.019

Distilled classifier scores by category (both heads)

CategoryCodexGemma
Metaresearch0.0040.004
Meta-epidemiology (narrow)0.0020.001
Meta-epidemiology (broad)0.0020.001
Bibliometrics0.0030.002
Science and technology studies0.0000.003
Scholarly communication0.0020.006
Open science0.0030.002
Research integrity0.0040.004
Insufficient payload (model declined to judge)0.0040.004

Machine scores (provisional)

The two teacher heads of the student model, read on this work. A score orders the frame for review; it never asserts a category, and the validation status ships verbatim with every row.

Baseline scores from an immature model (maturity gate not passed, 7 training rounds). Scores rank; they never assert a category.

Opus teacher head0.199
GPT teacher head0.331
Teacher spread0.132 · how far apart the two teachers sit on this one work
Validation statusscore_only:v0-immature-baseline · verbatim from the scoring run: score_only means the number may rank works, and no category label ships from it

Classification

machine, unvalidated

Machine predicted; a candidate call from one source (direct Gemma or distilled Codex), not a consensus.

The models applied no category: nothing in the taxonomy fit this work.
Study designNot applicable
Domainnot available
GenreReview

How this classification was reached, model by model and score by score, is at the end of the page under "How this classification was reached".

Quick stats

Citations52
Published2016
Admission routes1
Has abstractyes

Explore more

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