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Record W2515802788

Expression of kruppel-like factor 5 mediates anchorage-independent growth and good prognosis in human lung cancer.

2008· article· en· W2515802788 on OpenAlexaff
Jason R. Hasenstein, Avinash M. Baktula, Huajing Wan, Jeffrey A. Whitsett, C. Blake Gilks, H. Leighton Grimes

Bibliographic record

VenueCancer Research · 2008
Typearticle
Languageen
FieldBiochemistry, Genetics and Molecular Biology
TopicKruppel-like factors research
Canadian institutionsVancouver General Hospital
Fundersnot available
KeywordsGene knockdownMAPK/ERK pathwayCancer researchBiologyTranscription factorCell growthCarcinogenesisCell cycleSignal transductionCellCancerCell cultureCell biologyGeneGenetics
DOInot available

Abstract

fetched live from OpenAlex

84 Ras mutations have been identified in human lung adenocarcinoma; however, attempts to clinically target mutant Ras have encountered significant problems. The Ras/Erk pathway is responsible for much of the oncogenicty of the Ras oncoproteins, providing rationale for the analysis of Ras/Erk downstream signaling targets such as the transcription factor Kruppel-like Factor 5 (KLF5). The Ras/Erk pathway mediates the expression of KLF5. KLF5 may facilitate cell entry into the S phase of the cell cycle, and may regulate downstream mediators of Ras function in cell proliferation such as cyclin D1; however, KLF5 may also act in a tumor suppressive manner. We have generated a KLF5 specific antisera, and have determined that KLF5 is expressed in several mouse lung tumor models which stimulate Ras signaling. Moreover, we have applied this reagent to a tissue array of primary human lung cancer biopsies and found that patients with tumors expressing high levels of KLF5 have significantly better prognosis than those without KLF5 expression. To understand the molecular basis of this observation we overexpressed KLF5 in Ras-mutant human lung adenocarcinoma cell lines. In comparison to empty vector controls, growth rates of KLF5 overexpressing cells increased after (but not before) cultures became confluent. In contrast, knockdown of KLF5 expression limited growth. Moreover, soft agar assays showed a significant reduction in colony formation of KLF5 knockdown cells. These findings indicate that the KLF5 transcription factor may mediate anchorage independent growth in human lung cancer cells. Interestingly, anchorage independent growth is one function mutant Ras signaling. Gene expression analyses reveal that the putative KLF5 target gene cyclin D1 is deregulated upon manipulation of KLF5 in human lung adenocarcinoma cell lines. In mice, conditional deletion of Klf5 in the lung dramatically ablates cyclin D1 expression, but only in a subset of cells. These data provide the first validation of a Klf5 target gene in primary lung cells, and the first indication of the prognostic value of KLF5 expression in human lung cancer.

Fetched live from OpenAlex and de-inverted. Abstracts are not stored in this database: the inverted indexes are 8.6 GB of the frame’s 9.3 GB of text, and the host has 13 GB free.

How this classification was reachedexpand

Full frame distilled prediction

Teacher imitation

Not calibrated prevalence, not ground truth. Human validation pending. Learned from the 10,348 direct Codex labels and 10,348 direct Gemma labels. Candidate is the union of thresholded teacher heads; consensus is their intersection. These outputs are machine_predicted_unvalidated and are not human labels or direct frontier model labels.

metaresearch head score (Codex)0.000
metaresearch head score (Gemma)0.000
Version: codex-gemma-dda1882f352aValidation status: machine_predicted_unvalidated
Candidate categoriesnone
Consensus categoriesnone
DomainCandidate signal: none · Consensus signal: none
Study designCandidate signal: Bench or experimental · Consensus signal: Bench or experimental
GenreCandidate signal: Empirical · Consensus signal: Empirical
Teacher disagreement score0.254
Threshold uncertainty score0.804

Codex and Gemma teacher scores by category

CategoryCodexGemma
Metaresearch0.0000.000
Meta-epidemiology (narrow)0.0000.000
Meta-epidemiology (broad)0.0000.000
Bibliometrics0.0000.000
Science and technology studies0.0000.000
Scholarly communication0.0000.000
Open science0.0010.001
Research integrity0.0000.001
Insufficient payload (model declined to judge)0.0000.000

Machine scores (provisional)

The two teacher heads of the student model, read on this work. A score orders the frame for review; it never asserts a category, and the validation status ships verbatim with every row.

Baseline scores from an immature model (maturity gate not passed, 7 training rounds). Scores rank; they never assert a category.

Opus teacher head0.048
GPT teacher head0.387
Teacher spread0.339 · how far apart the two teachers sit on this one work
Validation statusscore_only:v0-immature-baseline · verbatim from the scoring run: score_only means the number may rank works, and no category label ships from it

Classification

machine, unvalidated

Machine predicted; a candidate call from one teacher head, not a consensus.

The models applied no category: nothing in the taxonomy fit this work.
Study designBench or experimental
Domainnot available
GenreEmpirical

How this classification was reached, model by model and score by score, is at the end of the page under "How this classification was reached".

Quick stats

Citations0
Published2008
Admission routes1
Has abstractyes

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