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Record W2517776895

Bacterial Antagonism and Plant Growth Promoting Traits of Actinobacterial Strains Previously Selected for their Antifungal Properties

2016· article· en· W2517776895 on OpenAlexaff
Lamia Aouar, Sylvain Lerat, Abbderrahmane Boulahrouf, Carole Beaulieu

Bibliographic record

VenueTransylvanian Review · 2016
Typearticle
Languageen
FieldAgricultural and Biological Sciences
TopicPlant-Microbe Interactions and Immunity
Canadian institutionsUniversité de Sherbrooke
Fundersnot available
KeywordsBiologySiderophoreStreptomycesMicrobiologyPectobacterium carotovorumErwiniaAgrobacteriumAgar plateAgrobacterium tumefaciensBacteriaStreptomyces griseusRhizobacteriaBotanyPathogenRhizosphereTransformation (genetics)Biochemistry
DOInot available

Abstract

fetched live from OpenAlex

Background : Six rhizospheric actinobacteria previously selected for their antifungal properties ( Streptomyces griseus Lac1, Streptomyces rochei Lac3, Streptomyces anulatus Pru14, Streptomyces champavatii Pru16, Nocardiopsis dassonvillei subsp. dassonvillei Vic8 and Nocardiopsis alba Pin10) were tested against plant pathogenic bacteria and for several beneficial traits promoting plant growth. Materials and methods: In vitro antagonism assay was determined by the plate diffusion method against phytopathogenic bacteria ( Streptomyces scabiei EF-35, Agrobacterium tumefaciens AL3, Erwinia amylovora SL1 and  Pectobacterium carotovorum CB2). In planta assay was performed on radish seedlings infected with S. scabies EF-35, using growth pouches. The root growth was estimated by analysis of data with the Winrhizo software. The indole-3-acetic acid  (auxin) and siderophore were produced in liquid culture, detected by colorimetric assay and quantified by HPLC.  Phosphate  solubilization was determined  on Pikovskaya’s agar. Results : Three of the six actinobacterial strains tested in vitro inhibited at least one (out of four) pathogenic bacterium. Strain Lac1 showed the largest growth inhibition spectrum (against Streptomyces scabiei EF-35, Agrobacterium tumefaciens AL3 and Erwinia amylovora SL1), while no actinobacterial strain showed the ability to inhibit the growth of Pectobacterium carotovorum CB2. During in vivo assays, strain Lac1 was the only bacterium to suppress the negative effects on the plant pathogen. All strains presented one or several characteristics of plant growth-promoting rhizobacteria such as indole-3-acetic acid production, phosphate solubilization and siderophores production. Conclusion : This investigation revealed the potential abilities of the six strains for the biological control of plant pathogens, Lac1 emerged as the most promising biocontrol agent. Key words : Actinobacteria, bacterial antagonism, IAA, phosphate solubilisation, siderophores.

Fetched live from OpenAlex and de-inverted. Abstracts are not stored in this database: the inverted indexes are 8.6 GB of the frame’s 9.3 GB of text, and the host has 13 GB free.

How this classification was reachedexpand

Full frame machine prediction

Teacher imitation

Not calibrated prevalence, not ground truth. Human validation pending. The Gemma side is a direct model label for every work in the frame, read from the title-only record. The Codex side is a classifier learned from the 10,348 direct Codex labels and calibrated to design-weighted sample rates; fields without enough sample support carry no Codex call. Candidate is the union of the two sides; consensus is their intersection. These outputs are machine_predicted_unvalidated and are not human labels.

metaresearch head score (Codex)0.000
metaresearch head score (Gemma)0.000
Version: metacan-v3-hybrid-931329e0061cValidation status: machine_predicted_unvalidated
Candidate categoriesnone
Consensus categoriesnone
DomainCandidate signal: none · Consensus signal: none
Study designCandidate signal: Bench or experimental · Consensus signal: Bench or experimental
GenreCandidate signal: Empirical · Consensus signal: Empirical
Teacher disagreement score0.001
Threshold uncertainty score0.003

Distilled classifier scores by category (both heads)

CategoryCodexGemma
Metaresearch0.0000.000
Meta-epidemiology (narrow)0.0010.000
Meta-epidemiology (broad)0.0000.000
Bibliometrics0.0000.000
Science and technology studies0.0000.000
Scholarly communication0.0000.000
Open science0.0000.000
Research integrity0.0000.001
Insufficient payload (model declined to judge)0.0010.000

Machine scores (provisional)

The two teacher heads of the student model, read on this work. A score orders the frame for review; it never asserts a category, and the validation status ships verbatim with every row.

Baseline scores from an immature model (maturity gate not passed, 7 training rounds). Scores rank; they never assert a category.

Opus teacher head0.032
GPT teacher head0.220
Teacher spread0.188 · how far apart the two teachers sit on this one work
Validation statusscore_only:v0-immature-baseline · verbatim from the scoring run: score_only means the number may rank works, and no category label ships from it

Classification

machine, unvalidated

Machine predicted; a candidate call from one source (direct Gemma or distilled Codex), not a consensus.

The models applied no category: nothing in the taxonomy fit this work.
Study designBench or experimental
Domainnot available
GenreEmpirical

How this classification was reached, model by model and score by score, is at the end of the page under "How this classification was reached".

Quick stats

Citations1
Published2016
Admission routes1
Has abstractyes

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