MétaCan
Menu
Back to cohort
Record W2518195604 · doi:10.1093/plankt/fbw057

Size-scaling of macromolecules and chemical energy content in the eukaryotic microalgae

2016· article· en· W2518195604 on OpenAlexafffund
Zoe V. Finkel, Michael J. Follows, Andrew J. Irwin

Bibliographic record

VenueJournal of Plankton Research · 2016
Typearticle
Languageen
FieldEnergy
TopicAlgal biology and biofuel production
Canadian institutionsMount Allison University
FundersCanada Research ChairsGordon and Betty Moore Foundation
KeywordsCell sizeAlgaeScalingVolume (thermodynamics)MacromoleculeBiologyDry weightBotanyEcologyBiochemistryPhysicsCell biologyMathematicsThermodynamics

Abstract

fetched live from OpenAlex

The macromolecular composition and cell size of microalgae can influence their competitive interactions for nutrients and food quality for predators. Here we quantify the cell volume and dry weight based size-scaling of protein, lipid, carbohydrate and chemical energy content of eukaryotic microalgae from data extracted from the scientific literature. Across all the microalgae examined, cell size is an excellent predictor of macromolecular and chemical energy content with size-scaling exponents ranging from 0.8 to 0.93 for cell volume and 0.96 to 1.1 for dry weight. There are second-order taxonomic differences in the size scaling of macromolecular and chemical energy content. Relative to the green algae and dinoflagellates, the diatoms have lower cell volume size-scaling exponents for protein, lipid and chemical energy content due to their larger increase in vacuole volume with increasing cell volume. The dinoflagellates have a lower size-scaling exponent for carbohydrate relative to the diatoms and green algae and the green algae have a relatively high size-scaling exponent for protein as compared to the diatoms. Differences in the size-scaling of macromolecular and chemical energy content across the diatoms, green algae and dinoflagellates appear to reflect fundamental differences in cellular architecture and growth and storage allocation strategies across these microalgal phyla.

Fetched live from OpenAlex and de-inverted. Abstracts are not stored in this database: the inverted indexes are 8.6 GB of the frame’s 9.3 GB of text, and the host has 13 GB free.

How this classification was reachedexpand

Full frame machine prediction

Teacher imitation

Not calibrated prevalence, not ground truth. Human validation pending. The Gemma side is a direct model label for every work in the frame, read from the title-only record. The Codex side is a classifier learned from the 10,348 direct Codex labels and calibrated to design-weighted sample rates; fields without enough sample support carry no Codex call. Candidate is the union of the two sides; consensus is their intersection. These outputs are machine_predicted_unvalidated and are not human labels.

metaresearch head score (Codex)0.000
metaresearch head score (Gemma)0.002
Version: metacan-v3-hybrid-931329e0061cValidation status: machine_predicted_unvalidated
Candidate categoriesnone
Consensus categoriesnone
DomainCandidate signal: none · Consensus signal: none
Study designCandidate signal: Bench or experimental · Consensus signal: Bench or experimental
GenreCandidate signal: Empirical · Consensus signal: Empirical
Teacher disagreement score0.003
Threshold uncertainty score0.002

Distilled classifier scores by category (both heads)

CategoryCodexGemma
Metaresearch0.0000.002
Meta-epidemiology (narrow)0.0000.000
Meta-epidemiology (broad)0.0000.000
Bibliometrics0.0030.002
Science and technology studies0.0000.000
Scholarly communication0.0000.001
Open science0.0000.000
Research integrity0.0000.000
Insufficient payload (model declined to judge)0.0000.000

Machine scores (provisional)

The two teacher heads of the student model, read on this work. A score orders the frame for review; it never asserts a category, and the validation status ships verbatim with every row.

Baseline scores from an immature model (maturity gate not passed, 7 training rounds). Scores rank; they never assert a category.

Opus teacher head0.063
GPT teacher head0.309
Teacher spread0.246 · how far apart the two teachers sit on this one work
Validation statusscore_only:v0-immature-baseline · verbatim from the scoring run: score_only means the number may rank works, and no category label ships from it

Classification

machine, unvalidated

Machine predicted; a candidate call from one source (direct Gemma or distilled Codex), not a consensus.

The models applied no category: nothing in the taxonomy fit this work.
Study designBench or experimental
Domainnot available
GenreEmpirical

How this classification was reached, model by model and score by score, is at the end of the page under "How this classification was reached".

Quick stats

Citations47
Published2016
Admission routes2
Has abstractyes

Explore more

Same venueJournal of Plankton ResearchSame topicAlgal biology and biofuel productionFrench-language works237,207