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Record W2526464401 · doi:10.1111/jbi.12860

Evolution in the South American ‘Lost World’: insights from multilocus phylogeography of stefanias (Anura, Hemiphractidae, <i>Stefania</i>)

2016· article· en· W2526464401 on OpenAlexaff
Philippe J. R. Kok, Valerio Giovanni Russo, Sebastian Ratz, D. Bruce Means, Ross D. MacCulloch, Amy Lathrop, Fabien Aubret, Franky Bossuyt

Bibliographic record

VenueJournal of Biogeography · 2016
Typearticle
Languageen
FieldEnvironmental Science
TopicAmphibian and Reptile Biology
Canadian institutionsRoyal Ontario Museum
FundersVlaamse regeringVrije Universiteit BrusselFonds Wetenschappelijk OnderzoekNational Geographic Society
KeywordsVicarianceBiologyBiogeographyBiological dispersalEcologyPhylogeographyGenusPhylogenetic treeEvolutionary biologyPopulation

Abstract

fetched live from OpenAlex

Abstract Aim To investigate the influence of tepuian geomorphology on species diversification in the Pantepui biogeographical region based on the phylogenetic relationships and divergence times of tepui‐endemic clades of stefania frogs ( Stefania , Hemiphractidae). Location The ‘tepuis’ and uplands/lowlands of the Pantepui biogeographical region of northern South America, one of the least accessible and least studied areas in the world. Methods Two mitochondrial and two nuclear DNA sequences from 60 individuals of Stefania from 24 localities in Pantepui were employed to infer phylogenetic affinities and estimate divergence times within the genus using both concatenation and species tree analyses. Ancestral areas were inferred using multiple models in a common likelihood framework. Results Phylogenetic analyses revealed high diversity in the genus Stefania with 10 candidate species in the Eastern Pantepui District. Four strongly supported clades are recovered in the area, one being exclusively composed of microendemics on isolated tepui summits. Biogeographical analyses suggest episodes of fragmentation of widespread tepuian ancestors from the onset of diversification of the genus, estimated in the Oligocene ( c. 26 Ma), therefore suggesting a neglected vicariant model of Pantepui evolution, the Plateau Theory. Main conclusions Although our results suggest that vicariance played an important role in the diversification of Stefania , speciation in Pantepui followed an intricate pattern implying multiple nonexclusive processes. Vicariance and dispersal likely influenced diversification patterns of the Pantepui fauna, possibly according to the following sequence: (1) Cenozoic vicariance; (2) reorganization of species diversity due to periods of climatic instability; (3) recent invasions (Pleistocene) of widespread upland taxa.

Fetched live from OpenAlex and de-inverted. Abstracts are not stored in this database: the inverted indexes are 8.6 GB of the frame’s 9.3 GB of text, and the host has 13 GB free.

How this classification was reachedexpand

Full frame distilled prediction

Teacher imitation

Not calibrated prevalence, not ground truth. Human validation pending. Learned from the 10,348 direct Codex labels and 10,348 direct Gemma labels. Candidate is the union of thresholded teacher heads; consensus is their intersection. These outputs are machine_predicted_unvalidated and are not human labels or direct frontier model labels.

metaresearch head score (Codex)0.000
metaresearch head score (Gemma)0.000
Version: codex-gemma-dda1882f352aValidation status: machine_predicted_unvalidated
Candidate categoriesnone
Consensus categoriesnone
DomainCandidate signal: none · Consensus signal: none
Study designCandidate signal: Observational · Consensus signal: Observational
GenreCandidate signal: Empirical · Consensus signal: Empirical
Teacher disagreement score0.085
Threshold uncertainty score0.600

Codex and Gemma teacher scores by category

CategoryCodexGemma
Metaresearch0.0000.000
Meta-epidemiology (narrow)0.0000.000
Meta-epidemiology (broad)0.0000.000
Bibliometrics0.0010.002
Science and technology studies0.0000.002
Scholarly communication0.0000.000
Open science0.0010.000
Research integrity0.0000.000
Insufficient payload (model declined to judge)0.0000.000

Machine scores (provisional)

The two teacher heads of the student model, read on this work. A score orders the frame for review; it never asserts a category, and the validation status ships verbatim with every row.

Baseline scores from an immature model (maturity gate not passed, 7 training rounds). Scores rank; they never assert a category.

Opus teacher head0.006
GPT teacher head0.204
Teacher spread0.198 · how far apart the two teachers sit on this one work
Validation statusscore_only:v0-immature-baseline · verbatim from the scoring run: score_only means the number may rank works, and no category label ships from it

Classification

machine, unvalidated

Machine predicted; a candidate call from one teacher head, not a consensus.

The models applied no category: nothing in the taxonomy fit this work.
Study designObservational
Domainnot available
GenreEmpirical

How this classification was reached, model by model and score by score, is at the end of the page under "How this classification was reached".

Quick stats

Citations44
Published2016
Admission routes1
Has abstractyes

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