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Record W2531930144 · doi:10.1164/rccm.201604-0730oc

DJ-1/PARK7 Impairs Bacterial Clearance in Sepsis

2016· article· en· W2531930144 on OpenAlexafffund
Hajera Amatullah, Yuexin Shan, Brittany L. Beauchamp, Patricia Louise Gali, Sahil Gupta, Tatiana Maron‐Gutierrez, Edwin R. Speck, Alison Fox‐Robichaud, Jennifer Tsang, Shirley H. J. Mei, Tak W. Mak, Patrícia R. M. Rocco, John W. Semple, Haibo Zhang, Pingzhao Hu, John C. Marshall, Duncan J. Stewart, Mary‐Ellen Harper, Patricia C. Liaw, W. Conrad Liles, Claúdia C. dos Santos

Bibliographic record

VenueAmerican Journal of Respiratory and Critical Care Medicine · 2016
Typearticle
Languageen
FieldImmunology and Microbiology
TopicNeutrophil, Myeloperoxidase and Oxidative Mechanisms
Canadian institutionsMcMaster UniversityUniversity of OttawaThrombosis and Atherosclerosis Research InstituteUniversity of ManitobaPrincess Margaret Cancer CentreOttawa HospitalUniversity Health NetworkUniversity of TorontoSt. Michael's Hospital
FundersUniversity of TorontoCanadian Institutes of Health ResearchUniversity of Ottawa
KeywordsSepsisInflammationPhagocytosisMedicineNADPH oxidaseReactive oxygen speciesMicrobiologyImmunologyPeripheral blood mononuclear cellBiologyIn vitroCell biologyBiochemistry

Abstract

fetched live from OpenAlex

Abstract Rationale Effective and rapid bacterial clearance is a fundamental determinant of outcomes in sepsis. DJ-1 is a well-established reactive oxygen species (ROS) scavenger. Objectives Because cellular ROS status is pivotal to inflammation and bacterial killing, we determined the role of DJ-1 in bacterial sepsis. Methods We used cell and murine models with gain- and loss-of-function experiments, plasma, and cells from patients with sepsis. Measurements and Main Results Stimulation of bone marrow–derived macrophages (BMMs) with endotoxin resulted in increased DJ-1 mRNA and protein expression. Cellular and mitochondrial ROS was increased in DJ-1–deficient (−/−) BMMs compared with wild-type. In a clinically relevant model of polymicrobial sepsis (cecal ligation and puncture), DJ-1−/− mice had improved survival and bacterial clearance. DJ-1−/− macrophages exhibited enhanced phagocytosis and bactericidal activity in vitro, and adoptive transfer of DJ-1−/− bone marrow–derived mononuclear cells rescued wild-type mice from cecal ligation and puncture–induced mortality. In stimulated BMMs, DJ-1 inhibited ROS production by binding to p47phox, a critical component of the NADPH oxidase complex, disrupting the complex and facilitating Nox2 (gp91phox) ubiquitination and degradation. Knocking down DJ-1 (siRNA) in THP-1 (human monocytic cell line) and polymorphonuclear cells from patients with sepsis enhanced bacterial killing and respiratory burst. DJ-1 protein levels were elevated in plasma from patients with sepsis. Higher levels of circulating DJ-1 were associated with increased organ failure and death. Conclusions These novel findings reveal DJ-1 impairs optimal ROS production for bacterial killing with important implications for host survival in sepsis.

Fetched live from OpenAlex and de-inverted. Abstracts are not stored in this database: the inverted indexes are 8.6 GB of the frame’s 9.3 GB of text, and the host has 13 GB free.

How this classification was reachedexpand

Full frame machine prediction

Teacher imitation

Not calibrated prevalence, not ground truth. Human validation pending. The Gemma side is a direct model label for every work in the frame, read from the title-only record. The Codex side is a classifier learned from the 10,348 direct Codex labels and calibrated to design-weighted sample rates; fields without enough sample support carry no Codex call. Candidate is the union of the two sides; consensus is their intersection. These outputs are machine_predicted_unvalidated and are not human labels.

metaresearch head score (Codex)0.000
metaresearch head score (Gemma)0.000
Version: metacan-v3-hybrid-931329e0061cValidation status: machine_predicted_unvalidated
Candidate categoriesnone
Consensus categoriesnone
DomainCandidate signal: none · Consensus signal: none
Study designCandidate signal: Bench or experimental · Consensus signal: Bench or experimental
GenreCandidate signal: Empirical · Consensus signal: Empirical
Teacher disagreement score0.002
Threshold uncertainty score0.007

Distilled classifier scores by category (both heads)

CategoryCodexGemma
Metaresearch0.0000.000
Meta-epidemiology (narrow)0.0000.000
Meta-epidemiology (broad)0.0000.000
Bibliometrics0.0000.000
Science and technology studies0.0000.000
Scholarly communication0.0000.000
Open science0.0000.000
Research integrity0.0000.001
Insufficient payload (model declined to judge)0.0020.000

Machine scores (provisional)

The two teacher heads of the student model, read on this work. A score orders the frame for review; it never asserts a category, and the validation status ships verbatim with every row.

Baseline scores from an immature model (maturity gate not passed, 7 training rounds). Scores rank; they never assert a category.

Opus teacher head0.015
GPT teacher head0.285
Teacher spread0.270 · how far apart the two teachers sit on this one work
Validation statusscore_only:v0-immature-baseline · verbatim from the scoring run: score_only means the number may rank works, and no category label ships from it

Classification

machine, unvalidated

Machine predicted; a candidate call from one source (direct Gemma or distilled Codex), not a consensus.

The models applied no category: nothing in the taxonomy fit this work.
Study designBench or experimental
Domainnot available
GenreEmpirical

How this classification was reached, model by model and score by score, is at the end of the page under "How this classification was reached".

Quick stats

Citations113
Published2016
Admission routes2
Has abstractyes

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