MétaCan
Menu
Back to cohort
Record W2532419447 · doi:10.1016/j.jalz.2016.06.1281

P2‐076: Alzheimer’s Disease Genetic Risk Variants Beyond <i>Apoe</i> ε4 Predict Mortality in The Adult Changes in Thought (ACT) Study

2016· article· en· W2532419447 on OpenAlexaff
Jesse Mez, Jessica R. Marden, Shubhabrata Mukherjee, Paul Brewster, Jamie Hamilton, Paola Gilsanz, Laura B. Zahodne, Alden L. Gross, Laura E. Gibbons, Paul K. Crane, Eric B. Larson, M. Maria Glymour

Bibliographic record

VenueAlzheimer s & Dementia · 2016
Typearticle
Languageen
FieldEnvironmental Science
TopicHealth, Environment, Cognitive Aging
Canadian institutionsUniversity of Victoria
Fundersnot available
KeywordsApolipoprotein EIncidence (geometry)DiseaseMedicinePopulationProportional hazards modelAlleleDemographyGerontologyCognitive declineSingle-nucleotide polymorphismLongevityInternal medicineDementiaGeneticsBiologyGenotypeGene

Abstract

fetched live from OpenAlex

Longevity studies in older adults have identified APOEε4 as a risk factor for death. This risk may be partially mediated through Alzheimer’s disease (AD) incidence, as APOEε4 has the largest genetic effect on AD incidence and AD is a leading cause of death in older adults. We hypothesized that an AD genetic risk score (GRS) that incorporated other genetic variants associated with AD incidence may be associated with survival in older adults. 2,330 cognitively normal non-Hispanic white Group Health members aged ≥65 were enrolled in the ACT study, had available genetic data and were followed longitudinally. At biennial evaluations, a Cognitive Abilities Screening Instrument ≤85 triggered clinical and neuropsychological evaluation and consideration of a NINCDS-ADRDA criteria AD consensus diagnosis. We generated a weighted AD GRS based on the effect sizes of 19 non-APOE SNPs that achieved genome wide significance in a large meta-analysis (Lambert et al., Nature Genetics 2013). We used a Cox proportional hazards model to estimate the effect of the AD GRS and APOE on time to death, controlling for enrollment age, enrollment age2, sex, 3 principal components of population substructure and study wave. In subsequent models, we controlled for CASI score at each visit and limited the analysis to those with an AD diagnosis. Mean AD GRS was -0.01 (sd=0.32). 25.7% of participants carried at least one APOEe4 allele. AD GRS was associated with mortality (HR=1.24; SE=0.10; P=0.02), but APOEε4 status was not (HR=1.03; SE=0.07; P=0.64). When we controlled for CASI score, AD GRS was no longer associated with mortality (HR=1.08; SE=0.05; P=0.52). When we limited the analysis to those with an AD diagnosis, AD GRS also was no longer associated with mortality (HR=0.94; SE=0.18; P=0.73). An AD GRS is associated with mortality, in addition to AD incidence. Our results suggest that the relationship between the AD GRS and mortality may be fully or partially mediated by cognitive changes, but not by AD disease progression.

Fetched live from OpenAlex and de-inverted. Abstracts are not stored in this database: the inverted indexes are 8.6 GB of the frame’s 9.3 GB of text, and the host has 13 GB free.

How this classification was reachedexpand

Full frame distilled prediction

Teacher imitation

Not calibrated prevalence, not ground truth. Human validation pending. Learned from the 10,348 direct Codex labels and 10,348 direct Gemma labels. Candidate is the union of thresholded teacher heads; consensus is their intersection. These outputs are machine_predicted_unvalidated and are not human labels or direct frontier model labels.

metaresearch head score (Codex)0.002
metaresearch head score (Gemma)0.000
Version: codex-gemma-dda1882f352aValidation status: machine_predicted_unvalidated
Candidate categoriesMeta-epidemiology (narrow), Insufficient payload (model declined to judge)
Consensus categoriesInsufficient payload (model declined to judge)
DomainCandidate signal: none · Consensus signal: none
Study designCandidate signal: Observational · Consensus signal: Observational
GenreCandidate signal: Empirical · Consensus signal: Empirical
Teacher disagreement score0.053
Threshold uncertainty score1.000

Codex and Gemma teacher scores by category

CategoryCodexGemma
Metaresearch0.0020.000
Meta-epidemiology (narrow)0.0000.000
Meta-epidemiology (broad)0.0000.000
Bibliometrics0.0000.001
Science and technology studies0.0000.000
Scholarly communication0.0000.000
Open science0.0010.001
Research integrity0.0000.000
Insufficient payload (model declined to judge)0.0020.001

Machine scores (provisional)

The two teacher heads of the student model, read on this work. A score orders the frame for review; it never asserts a category, and the validation status ships verbatim with every row.

Baseline scores from an immature model (maturity gate not passed, 7 training rounds). Scores rank; they never assert a category.

Opus teacher head0.024
GPT teacher head0.273
Teacher spread0.249 · how far apart the two teachers sit on this one work
Validation statusscore_only:v0-immature-baseline · verbatim from the scoring run: score_only means the number may rank works, and no category label ships from it

Classification

machine, unvalidated

Machine predicted; both teacher heads agree on what is shown here.

Study designObservational
Domainnot available
GenreEmpirical

How this classification was reached, model by model and score by score, is at the end of the page under "How this classification was reached".

Quick stats

Citations2
Published2016
Admission routes1
Has abstractyes

Explore more

Same venueAlzheimer s & DementiaSame topicHealth, Environment, Cognitive AgingFrench-language works237,207