MétaCan
Menu
Back to cohort
Record W2532674537 · doi:10.1139/cjb-2016-0198

Medicinal mushroom <i>Agaricus subrufescens</i> from Iran shares genetic markers with specimens from China and Thailand

2016· article· en· W2532674537 on OpenAlexvenueno aff
Valiollah Mahdizadeh, Naser Safaie, Ebrahim Mohammadi Goltapeh, Mohammad Reza Asef, Philippe Callac

Bibliographic record

VenueBotany · 2016
Typearticle
Languageen
FieldMedicine
TopicFungal Biology and Applications
Canadian institutionsnot available
Fundersnot available
KeywordsBiologyInternal transcribed spacerChinaGermplasmAgaricusMushroomEast AsiaBotanyType (biology)Range (aeronautics)Sequence analysisEvolutionary biologyRibosomal RNAGeographyGeneGeneticsEcologyArchaeology

Abstract

fetched live from OpenAlex

Agaricus subrufescens Peck is a cosmopolitan species of nutritional and medicinal interest. Three types of internal transcribed spacer (ITS) rDNA sequences were recently characterized for this species. Sequences of types A, B, or both types A and B are found in American and European specimens, while sequences of type C are found in Asian (China and Thailand) and Oceanian (Hawaii) specimens. We report on a collection of this species from Iran, for the first time. Both the morphological features and ITS sequence confirm its identification as A. subrufescens. Its ITS sequence was of type C and even identical to that of specimens previously reported from Hawaii, China, and Thailand. This sequence differed from those of Europe or the Americas, where most current cultivars originate. The discovery of a specimen likely native to Iran extends the known distribution range of the ITS sequence of type C from East Asia to Iran. More collections from West Asia (and elsewhere, for example Africa) would help to better know the distribution area of the different types of ITS sequences and to increase the available germplasm resources of A. subrufescens.

Fetched live from OpenAlex and de-inverted. Abstracts are not stored in this database: the inverted indexes are 8.6 GB of the frame’s 9.3 GB of text, and the host has 13 GB free.

How this classification was reachedexpand

Full frame distilled prediction

Teacher imitation

Not calibrated prevalence, not ground truth. Human validation pending. Learned from the 10,348 direct Codex labels and 10,348 direct Gemma labels. Candidate is the union of thresholded teacher heads; consensus is their intersection. These outputs are machine_predicted_unvalidated and are not human labels or direct frontier model labels.

metaresearch head score (Codex)0.000
metaresearch head score (Gemma)0.000
Version: codex-gemma-dda1882f352aValidation status: machine_predicted_unvalidated
Candidate categoriesInsufficient payload (model declined to judge)
Consensus categoriesnone
DomainCandidate signal: none · Consensus signal: none
Study designCandidate signal: Observational · Consensus signal: Observational
GenreCandidate signal: Empirical · Consensus signal: Empirical
Teacher disagreement score0.257
Threshold uncertainty score1.000

Codex and Gemma teacher scores by category

CategoryCodexGemma
Metaresearch0.0000.000
Meta-epidemiology (narrow)0.0000.000
Meta-epidemiology (broad)0.0000.000
Bibliometrics0.0000.000
Science and technology studies0.0000.000
Scholarly communication0.0000.000
Open science0.0000.000
Research integrity0.0000.000
Insufficient payload (model declined to judge)0.0010.000

Machine scores (provisional)

The two teacher heads of the student model, read on this work. A score orders the frame for review; it never asserts a category, and the validation status ships verbatim with every row.

Baseline scores from an immature model (maturity gate not passed, 7 training rounds). Scores rank; they never assert a category.

Opus teacher head0.009
GPT teacher head0.214
Teacher spread0.205 · how far apart the two teachers sit on this one work
Validation statusscore_only:v0-immature-baseline · verbatim from the scoring run: score_only means the number may rank works, and no category label ships from it

Classification

machine, unvalidated

Machine predicted; a candidate call from one teacher head, not a consensus.

Study designObservational
Domainnot available
GenreEmpirical

How this classification was reached, model by model and score by score, is at the end of the page under "How this classification was reached".

Quick stats

Citations2
Published2016
Admission routes1
Has abstractyes

Explore more

Same venueBotanySame topicFungal Biology and ApplicationsFrench-language works237,207