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Record W2545301885 · doi:10.1002/ece3.2563

Assessing polar bear (<i>Ursus maritimus</i>) population structure in the Hudson Bay region using <scp>SNP</scp>s

2016· article· en· W2545301885 on OpenAlexafffundabout
Michelle Viengkone, Andrew E. Derocher, Evan S. Richardson, René M. Malenfant, Joshua M. Miller, Martyn E. Obbard, Markus Dyck, Vicki Sahanatien, Corey S. Davis

Bibliographic record

VenueEcology and Evolution · 2016
Typearticle
Languageen
FieldEnvironmental Science
TopicMarine animal studies overview
Canadian institutionsTrent UniversityMinistry of Natural Resources and ForestryEnvironment and Climate Change CanadaUniversity of New BrunswickGovernment of NunavutAlberta Environment and Protected AreasUniversity of Alberta
FundersAboriginal Affairs and Northern Development CanadaEnvironment CanadaNatural Sciences and Engineering Research Council of CanadaDirectorate for Biological SciencesAlberta InnovatesChurchill Northern Studies CentreUniversity of AlbertaParks CanadaWorld Wildlife Fund
KeywordsBayUrsus maritimusPopulationGeographyMicrosatelliteEcologyGenetic structurePopulation geneticsBiologyZoologyArcticArchaeologyGenetic variationGeneticsDemographyAllele

Abstract

fetched live from OpenAlex

Abstract Defining subpopulations using genetics has traditionally used data from microsatellite markers to investigate population structure; however, single‐nucleotide polymorphisms ( SNP s) have emerged as a tool for detection of fine‐scale structure. In Hudson Bay, Canada, three polar bear ( Ursus maritimus ) subpopulations (Foxe Basin ( FB ), Southern Hudson Bay ( SH ), and Western Hudson Bay ( WH )) have been delineated based on mark–recapture studies, radiotelemetry and satellite telemetry, return of marked animals in the subsistence harvest, and population genetics using microsatellites. We used SNP s to detect fine‐scale population structure in polar bears from the Hudson Bay region and compared our results to the current designations using 414 individuals genotyped at 2,603 SNP s. Analyses based on discriminant analysis of principal components ( DAPC ) and STRUCTURE support the presence of four genetic clusters: (i) Western—including individuals sampled in WH , SH (excluding Akimiski Island in James Bay), and southern FB (south of Southampton Island); (ii) Northern—individuals sampled in northern FB (Baffin Island) and Davis Strait ( DS ) (Labrador coast); (iii) Southeast—individuals from SH (Akimiski Island in James Bay); and (iv) Northeast—individuals from DS (Baffin Island). Population structure differed from microsatellite studies and current management designations demonstrating the value of using SNP s for fine‐scale population delineation in polar bears.

Fetched live from OpenAlex and de-inverted. Abstracts are not stored in this database: the inverted indexes are 8.6 GB of the frame’s 9.3 GB of text, and the host has 13 GB free.

How this classification was reachedexpand

Full frame distilled prediction

Teacher imitation

Not calibrated prevalence, not ground truth. Human validation pending. Learned from the 10,348 direct Codex labels and 10,348 direct Gemma labels. Candidate is the union of thresholded teacher heads; consensus is their intersection. These outputs are machine_predicted_unvalidated and are not human labels or direct frontier model labels.

metaresearch head score (Codex)0.000
metaresearch head score (Gemma)0.000
Version: codex-gemma-dda1882f352aValidation status: machine_predicted_unvalidated
Candidate categoriesnone
Consensus categoriesnone
DomainCandidate signal: none · Consensus signal: none
Study designCandidate signal: Observational · Consensus signal: Observational
GenreCandidate signal: Empirical · Consensus signal: Empirical
Teacher disagreement score0.009
Threshold uncertainty score0.618

Codex and Gemma teacher scores by category

CategoryCodexGemma
Metaresearch0.0000.000
Meta-epidemiology (narrow)0.0000.000
Meta-epidemiology (broad)0.0000.000
Bibliometrics0.0000.000
Science and technology studies0.0000.000
Scholarly communication0.0000.000
Open science0.0000.000
Research integrity0.0000.000
Insufficient payload (model declined to judge)0.0000.000

Machine scores (provisional)

The two teacher heads of the student model, read on this work. A score orders the frame for review; it never asserts a category, and the validation status ships verbatim with every row.

Baseline scores from an immature model (maturity gate not passed, 7 training rounds). Scores rank; they never assert a category.

Opus teacher head0.022
GPT teacher head0.255
Teacher spread0.233 · how far apart the two teachers sit on this one work
Validation statusscore_only:v0-immature-baseline · verbatim from the scoring run: score_only means the number may rank works, and no category label ships from it

Classification

machine, unvalidated

Machine predicted; a candidate call from one teacher head, not a consensus.

The models applied no category: nothing in the taxonomy fit this work.
Study designObservational
Domainnot available
GenreEmpirical

How this classification was reached, model by model and score by score, is at the end of the page under "How this classification was reached".

Quick stats

Citations66
Published2016
Admission routes3
Has abstractyes

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