MétaCan
Menu
Back to cohort
Record W2546688631 · doi:10.3389/fncom.2016.00110

Simultaneous Bayesian Estimation of Excitatory and Inhibitory Synaptic Conductances by Exploiting Multiple Recorded Trials

2016· article· en· W2546688631 on OpenAlexafffund
Milad Lankarany, Jaime E. Heiss, Ilan Lampl, Taro Toyoizumi

Bibliographic record

VenueFrontiers in Computational Neuroscience · 2016
Typearticle
Languageen
FieldNeuroscience
TopicNeural dynamics and brain function
Canadian institutionsHospital for Sick ChildrenSickKids FoundationUniversity of Toronto
FundersRIKEN Brain Science InstituteRIKENFonds de Recherche du Québec - SantéJapan Agency for Medical Research and Development
KeywordsExcitatory postsynaptic potentialComputer scienceInhibitory postsynaptic potentialBayesian probabilityBayes' theoremInferenceArtificial intelligenceBayesian inferenceMachine learningNeuroscienceBiology

Abstract

fetched live from OpenAlex

Advanced statistical methods have enabled trial-by-trial inference of the underlying excitatory and inhibitory synaptic conductances of the membrane potential recordings. Simultaneous inference of both excitatory and inhibitory conductances sheds light into the neural circuits underlying the neural activity and advances our understanding on neural information processing. Conventional Bayesian methods can infer excitatory and inhibitory synaptic conductances based on a single trial of observed membrane potential. However, if multiple recorded trials are available, this typically leads to suboptimal estimation because they neglect common statistics (of synaptic inputs) across trials. Here, we establish a new expectation maximization (EM) algorithm that improves such single-trial Bayesian methods by exploiting multiple recorded trials to extract common synaptic input statistics across the trials. In this paper, the proposed EM algorithm is embedded in parallel Kalman filters (KFs) and Particle filters (PFs) for multiple recorded trials to integrate their outputs to iteratively update the common synaptic input statistics. These statistics are then used to infer the excitatory and inhibitory synaptic conductances of individual trials. We demonstrate the superior performance of these multiple-trial Kalman Filter (MtKF) and Particle Filter (MtPF) methods relative to the corresponding single-trial methods. While relative estimation error of excitatory and inhibitory conductances is known to depend on the level of current injection into a cell, our numerical simulations using MtKF show that both excitatory and inhibitory condutances are reliably inferred using an optimal level of current injection. Finally, we validate the robustness and applicability of our technique through simulation studies and apply the MtKF algorithm to in-vivo data recorded from rat barrel cortex.

Fetched live from OpenAlex and de-inverted. Abstracts are not stored in this database: the inverted indexes are 8.6 GB of the frame’s 9.3 GB of text, and the host has 13 GB free.

How this classification was reachedexpand

Full frame machine prediction

Teacher imitation

Not calibrated prevalence, not ground truth. Human validation pending. The Gemma side is a direct model label for every work in the frame, read from the title-only record. The Codex side is a classifier learned from the 10,348 direct Codex labels and calibrated to design-weighted sample rates; fields without enough sample support carry no Codex call. Candidate is the union of the two sides; consensus is their intersection. These outputs are machine_predicted_unvalidated and are not human labels.

metaresearch head score (Codex)0.002
metaresearch head score (Gemma)0.010
Version: metacan-v3-hybrid-931329e0061cValidation status: machine_predicted_unvalidated
Candidate categoriesnone
Consensus categoriesnone
DomainCandidate signal: none · Consensus signal: none
Study designCandidate signal: Simulation or modeling · Consensus signal: Simulation or modeling
GenreCandidate signal: Methods · Consensus signal: Methods
Teacher disagreement score0.003
Threshold uncertainty score0.010

Distilled classifier scores by category (both heads)

CategoryCodexGemma
Metaresearch0.0020.010
Meta-epidemiology (narrow)0.0010.001
Meta-epidemiology (broad)0.0010.001
Bibliometrics0.0000.001
Science and technology studies0.0000.001
Scholarly communication0.0010.002
Open science0.0010.001
Research integrity0.0010.002
Insufficient payload (model declined to judge)0.0010.000

Machine scores (provisional)

The two teacher heads of the student model, read on this work. A score orders the frame for review; it never asserts a category, and the validation status ships verbatim with every row.

Baseline scores from an immature model (maturity gate not passed, 7 training rounds). Scores rank; they never assert a category.

Opus teacher head0.034
GPT teacher head0.271
Teacher spread0.237 · how far apart the two teachers sit on this one work
Validation statusscore_only:v0-immature-baseline · verbatim from the scoring run: score_only means the number may rank works, and no category label ships from it

Classification

machine, unvalidated

Machine predicted; a candidate call from one source (direct Gemma or distilled Codex), not a consensus.

The models applied no category: nothing in the taxonomy fit this work.
Study designSimulation or modeling
Domainnot available
GenreMethods

How this classification was reached, model by model and score by score, is at the end of the page under "How this classification was reached".

Quick stats

Citations15
Published2016
Admission routes2
Has abstractyes

Explore more

Same venueFrontiers in Computational NeuroscienceSame topicNeural dynamics and brain functionFrench-language works237,207