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Record W2548061758 · doi:10.1139/cjfr-2016-0311

Estimating the genetic diversity and structure of <i>Quercus trojana</i> Webb populations in Italy by SSRs: implications for management and conservation

2016· article· en· W2548061758 on OpenAlexvenueno aff
Maddalena Carabeo, Marco Cosimo Simeone, M. Cherubini, Chiara Mattia, Francesca Chiocchini, Laura Bertini, Carla Caruso, Tommaso La Mantia, Fiorella Villani, Claudia Mattioni

Bibliographic record

VenueCanadian Journal of Forest Research · 2016
Typearticle
Languageen
FieldBiochemistry, Genetics and Molecular Biology
TopicGenetic diversity and population structure
Canadian institutionsnot available
FundersRegione Puglia
KeywordsGenetic diversityBiologyRange (aeronautics)Genetic structureConservation geneticsGene flowEcologyPopulation fragmentationPopulationMicrosatelliteGeographyAlleleDemography

Abstract

fetched live from OpenAlex

Studying the genetic diversity and structure of the current forest populations is essential for evaluating the ability to survive future biotic and abiotic changes and planning conservation strategies. Quercus trojana Webb is an eastern Mediterranean tree species with a fragmented distribution range, and its westernmost outposts are located in southern Italy. The demand for timber and cropland over the centuries has severely reduced its occurrence in this part of the range. We assessed the genetic diversity and structure of the extant Italian populations of Q. trojana and derived conservation guidelines. A total of 322 samples were genotyped with six polymorphic nuclear microsatellite markers. A high genetic diversity in all populations, two main gene pools, and a highly divergent single population were observed. Based on the allelic richness and heterozygosity estimation, we identified populations that can be considered as valuable source material for conservation programs and those requiring adequate measures to reestablish gene flow and reduce fragmentation. Finally, a comparison with a set of eastern Mediterranean samples indicated a relationship between the Italian and the Greek gene pools. The need to protect these marginal, disjunct populations was further reinforced.

Fetched live from OpenAlex and de-inverted. Abstracts are not stored in this database: the inverted indexes are 8.6 GB of the frame’s 9.3 GB of text, and the host has 13 GB free.

How this classification was reachedexpand

Full frame machine prediction

Teacher imitation

Not calibrated prevalence, not ground truth. Human validation pending. The Gemma side is a direct model label for every work in the frame, read from the title-only record. The Codex side is a classifier learned from the 10,348 direct Codex labels and calibrated to design-weighted sample rates; fields without enough sample support carry no Codex call. Candidate is the union of the two sides; consensus is their intersection. These outputs are machine_predicted_unvalidated and are not human labels.

metaresearch head score (Codex)0.001
metaresearch head score (Gemma)0.001
Version: metacan-v3-hybrid-931329e0061cValidation status: machine_predicted_unvalidated
Candidate categoriesnone
Consensus categoriesnone
DomainCandidate signal: none · Consensus signal: none
Study designCandidate signal: Observational · Consensus signal: Observational
GenreCandidate signal: Empirical · Consensus signal: Empirical
Teacher disagreement score0.009
Threshold uncertainty score0.018

Distilled classifier scores by category (both heads)

CategoryCodexGemma
Metaresearch0.0010.001
Meta-epidemiology (narrow)0.0000.000
Meta-epidemiology (broad)0.0000.000
Bibliometrics0.0020.001
Science and technology studies0.0000.000
Scholarly communication0.0000.000
Open science0.0000.000
Research integrity0.0000.000
Insufficient payload (model declined to judge)0.0010.000

Machine scores (provisional)

The two teacher heads of the student model, read on this work. A score orders the frame for review; it never asserts a category, and the validation status ships verbatim with every row.

Baseline scores from an immature model (maturity gate not passed, 7 training rounds). Scores rank; they never assert a category.

Opus teacher head0.048
GPT teacher head0.304
Teacher spread0.256 · how far apart the two teachers sit on this one work
Validation statusscore_only:v0-immature-baseline · verbatim from the scoring run: score_only means the number may rank works, and no category label ships from it

Classification

machine, unvalidated

Machine predicted; a candidate call from one source (direct Gemma or distilled Codex), not a consensus.

The models applied no category: nothing in the taxonomy fit this work.
Study designObservational
Domainnot available
GenreEmpirical

How this classification was reached, model by model and score by score, is at the end of the page under "How this classification was reached".

Quick stats

Citations11
Published2016
Admission routes1
Has abstractyes

Explore more

Same venueCanadian Journal of Forest Research→Same topicGenetic diversity and population structure→French-language works237,207→