MétaCan
Menu
Back to cohort
Record W2549839315 · doi:10.18632/oncotarget.13625

Cancer initiating-cells are enriched in the CA9 positive fraction of primary cervix cancer xenografts

2016· article· en· W2549839315 on OpenAlexafffundabout
Delphine T. Marie‐Egyptienne, Naz Chaudary, Tuula Kalliomäki, David W. Hedley, Rićhard P. Hill

Bibliographic record

VenueOncotarget · 2016
Typearticle
Languageen
FieldBiochemistry, Genetics and Molecular Biology
TopicEpigenetics and DNA Methylation
Canadian institutionsPrincess Margaret Cancer CentreUniversity of TorontoUniversity Health Network
FundersHospital for Sick Children
KeywordsCancer stem cellCancerCervixCancer researchCancer cellStem cell markerStem cellIn vivoBiologyMedicinePathologyImmunologyCell biologyInternal medicineGenetics

Abstract

fetched live from OpenAlex

// Delphine Tamara Marie-Egyptienne 1, 3 , Naz Chaudary 1 , Tuula Kalliomäki 1, 3 , David William Hedley 1, 2, 3, 4 , Richard Peter Hill 1, 3, 5 1 Ontario Cancer Institute/Princess Margaret Cancer Centre, University Health Network and Campbell Family Institute for Cancer Research, Toronto, Ontario, M5G2M9, Canada 2 Department of Medical Oncology, Princess Margaret Cancer Centre, Toronto, Ontario, M5G2M9, Canada 3 Department of Medical Biophysics, University of Toronto, Toronto, Ontario, Canada 4 Department of Laboratory Medicine and Pathology, University of Toronto, Toronto, Ontario, Canada 5 Department of Radiation Oncology, University of Toronto, Toronto, Ontario, Canada Correspondence to: Richard Peter Hill, email: hill@uhnres.utoronto.ca Keywords: cervix cancer, xenogratfs, stem cells, hypoxia, carbonic anhydrase 9 Received: August 20, 2016      Accepted: November 07, 2016      Published: November 25, 2016 ABSTRACT Numerous studies have suggested that Cancer Initiating Cells (CIC) can be identified/enriched in cell populations obtained from solid tumors based on the expression of cell surface marker proteins. We used early passage primary cervix cancer xenografts to sort cells based on the expression of the intrinsic hypoxia marker Carbonic Anhydrase 9 (CA9) and tested their cancer initiation potential by limiting dilution assay. We demonstrated that CICs are significantly enriched in the CA9 + fraction in 5/6 models studied. Analyses of the expression of the stem cell markers Oct4, Notch1, Sca-1 & Bmi1 showed a trend toward an increase in the CA9 + populations, albeit not significant. We present evidence that enhanced autophagy does not play a role in the enhanced growth of the CA9 + cells. Our study suggests a direct in vivo functional link between hypoxic cells and CICs in primary cervix cancer xenografts.

Fetched live from OpenAlex and de-inverted. Abstracts are not stored in this database: the inverted indexes are 8.6 GB of the frame’s 9.3 GB of text, and the host has 13 GB free.

How this classification was reachedexpand

Full frame distilled prediction

Teacher imitation

Not calibrated prevalence, not ground truth. Human validation pending. Learned from the 10,348 direct Codex labels and 10,348 direct Gemma labels. Candidate is the union of thresholded teacher heads; consensus is their intersection. These outputs are machine_predicted_unvalidated and are not human labels or direct frontier model labels.

metaresearch head score (Codex)0.000
metaresearch head score (Gemma)0.000
Version: codex-gemma-dda1882f352aValidation status: machine_predicted_unvalidated
Candidate categoriesnone
Consensus categoriesnone
DomainCandidate signal: none · Consensus signal: none
Study designCandidate signal: Bench or experimental · Consensus signal: Bench or experimental
GenreCandidate signal: Empirical · Consensus signal: Empirical
Teacher disagreement score0.269
Threshold uncertainty score0.279

Codex and Gemma teacher scores by category

CategoryCodexGemma
Metaresearch0.0000.000
Meta-epidemiology (narrow)0.0000.000
Meta-epidemiology (broad)0.0000.000
Bibliometrics0.0000.000
Science and technology studies0.0000.000
Scholarly communication0.0000.000
Open science0.0000.000
Research integrity0.0000.000
Insufficient payload (model declined to judge)0.0000.000

Machine scores (provisional)

The two teacher heads of the student model, read on this work. A score orders the frame for review; it never asserts a category, and the validation status ships verbatim with every row.

Baseline scores from an immature model (maturity gate not passed, 7 training rounds). Scores rank; they never assert a category.

Opus teacher head0.014
GPT teacher head0.280
Teacher spread0.265 · how far apart the two teachers sit on this one work
Validation statusscore_only:v0-immature-baseline · verbatim from the scoring run: score_only means the number may rank works, and no category label ships from it

Classification

machine, unvalidated

Machine predicted; a candidate call from one teacher head, not a consensus.

The models applied no category: nothing in the taxonomy fit this work.
Study designBench or experimental
Domainnot available
GenreEmpirical

How this classification was reached, model by model and score by score, is at the end of the page under "How this classification was reached".

Quick stats

Citations9
Published2016
Admission routes3
Has abstractyes

Explore more

Same venueOncotargetSame topicEpigenetics and DNA MethylationFrench-language works237,207