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LATE-BREAKING ABSTRACT: Inhaled diesel exhaust alters immune response proteins in the bronchial secretome in humans

2016· article· en· W2550638833 on OpenAlexaff
Neeloffer Mookherjee, Peyman Ezzati, Victor Spicer, Christopher Carlsten

Bibliographic record

Venuenot available
Typearticle
Languageen
FieldEnvironmental Science
TopicAir Quality and Health Impacts
Canadian institutionsUniversity of British ColumbiaUniversity of Manitoba
Fundersnot available
KeywordsImmune systemImmunologyMedicineBronchoalveolar lavageChemokineSecretionMolecular biologyBiologyEndocrinologyInternal medicine

Abstract

fetched live from OpenAlex

Rationale: Diesel exhaust (DE), a paradigm for air pollution, is associated with respiratory diseases. Protein changes following DE exposure in humans are poorly elucidated. Objective: To define changes in the bronchial secretome following exposure to inhaled DE, using a controlled human exposure study. Methods: Mild asthmatics inhaled filtered air (FA) and DE (300 mg/m3) for 2h (crossover; random order). Bronchoalveolar lavage (BAL) was obtained 48 hr after each exposure. Pooled BAL (n=5 per condition) was processed by LC-MS/MS. Protein expression intensity was determined by spectral counting. Results: Expressions of 340 secreted proteins were significantly altered in response to inhaled DE compared to FA. Expressions of 38 proteins were enhanced >4-fold in response to DE compared to FA (Fig. 1). DE-induced proteins were overrepresented in CDK5, Cdc42 and clathrin-mediated endocytosis pathways. Upstream regulators predicted to be activated were IFNA2 and retinoic acid. DE enhanced proteins related to immune processes (Fig. 1). Conclusion: This is the first comprehensive interrogation of the airway secretome following inhaled DE exposure in humans. This study details DE-driven induction of proteins related to immune responses in the bronchial environment. Fig. 1 Proteins altered by inhaled DE, interactome by Ingenuity Pathway Analysis: Red = induced by DE; Green = suppressed by DE.

Fetched live from OpenAlex and de-inverted. Abstracts are not stored in this database: the inverted indexes are 8.6 GB of the frame’s 9.3 GB of text, and the host has 13 GB free.

How this classification was reachedexpand

Full frame machine prediction

Teacher imitation

Not calibrated prevalence, not ground truth. Human validation pending. The Gemma side is a direct model label for every work in the frame, read from the title-only record. The Codex side is a classifier learned from the 10,348 direct Codex labels and calibrated to design-weighted sample rates; fields without enough sample support carry no Codex call. Candidate is the union of the two sides; consensus is their intersection. These outputs are machine_predicted_unvalidated and are not human labels.

metaresearch head score (Codex)0.000
metaresearch head score (Gemma)0.000
Version: metacan-v3-hybrid-931329e0061cValidation status: machine_predicted_unvalidated
Candidate categoriesnone
Consensus categoriesnone
DomainCandidate signal: none · Consensus signal: none
Study designCandidate signal: Observational · Consensus signal: none
GenreCandidate signal: Empirical · Consensus signal: Empirical
Teacher disagreement score0.004
Threshold uncertainty score0.012

Distilled classifier scores by category (both heads)

CategoryCodexGemma
Metaresearch0.0000.000
Meta-epidemiology (narrow)0.0000.000
Meta-epidemiology (broad)0.0000.000
Bibliometrics0.0000.000
Science and technology studies0.0000.000
Scholarly communication0.0000.000
Open science0.0000.000
Research integrity0.0000.000
Insufficient payload (model declined to judge)0.0040.001

Machine scores (provisional)

The two teacher heads of the student model, read on this work. A score orders the frame for review; it never asserts a category, and the validation status ships verbatim with every row.

Baseline scores from an immature model (maturity gate not passed, 7 training rounds). Scores rank; they never assert a category.

Opus teacher head0.040
GPT teacher head0.305
Teacher spread0.265 · how far apart the two teachers sit on this one work
Validation statusscore_only:v0-immature-baseline · verbatim from the scoring run: score_only means the number may rank works, and no category label ships from it

Classification

machine, unvalidated

Machine predicted; a candidate call from one source (direct Gemma or distilled Codex), not a consensus.

The models applied no category: nothing in the taxonomy fit this work.
Study designObservational
Domainnot available
GenreEmpirical

How this classification was reached, model by model and score by score, is at the end of the page under "How this classification was reached".

Quick stats

Citations0
Published2016
Admission routes1
Has abstractyes

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