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A Sensitized Screen Uncovers a Novel Platelet Phenotype in a Loss-of-Function Jak2 Allele.

2009· article· en· W2556851306 on OpenAlexaff
Nicole Anderson, Mojib Javadi Javed, Monica L. Bailey, Kai Huang, Zorana Berberovic, Ann M. Flenniken, Chen Wang, Mark D. Minden, Robert F. Paulson, Kelly M. McNagny, William L. Stanford, Dwayne L. Barber

Bibliographic record

VenueBlood · 2009
Typearticle
Languageen
FieldMedicine
TopicMyeloproliferative Neoplasms: Diagnosis and Treatment
Canadian institutionsUniversity of British ColumbiaMount Sinai HospitalPrincess Margaret Cancer CentreUniversity of TorontoToronto Centre for PhenogenomicsOntario Institute for Cancer Research
Fundersnot available
KeywordsTransversionBiologyMutationMolecular biologyMutantGeneticsPhenotypeExonAlleleMutagenesisGene

Abstract

fetched live from OpenAlex

Abstract Abstract 2516 Poster Board II-493 Our group has undertaken a concerted effort to develop novel heritable mouse strains via ethylnitrosourea (ENU)-based random mutagenesis. We have complemented this strategy to perform a dominant sensitized screen to identify mouse mutants with altered recovery following treatment with 5-fluoruracil (5-FU). We isolated a heritable line with elevated platelets as well as an overshoot in platelet numbers when exposed to 5-FU. Affected mice also displayed megakaryocytosis and centrilobular hepatic lipidosis. The mutation was mapped to a 8.7Mb region on mouse Chromosome 19, which contained the candidate gene Jak2. The entire coding region of Jak2 was sequenced and a mutation in exon 19 was found. The causative mutation was located at nucleotide 2740 and leads to an A to T transversion in exon 19 of JAK2 and causes a substitution of a Lys to a premature stop codon at amino acid 914. The resulting protein product terminates within the JH1 kinase domain of JAK2. JAK2 914 is distinct from the JAK2 null allele characterized by the Ihle and Pfeffer labs. For example, JAK2−/− embryos die at E12.5, whereas JAK2914/914 embryos survive until E13.5, suggesting that the truncated protein product may serve as a scaffold. Differences were also observed in clonogenic potential of both strains. For example, JAK2+/− mice had increased CFU-C whereas JAK2914/+ were normal. Splenic BFU-E and CFU-C were increased in JAK2+/− mice while both cell types were decreased in JAK2914/+. In contrast, bone marrow CFU-E were increased in both strains of mice and splenic CFU-E were normal in JAK2+/− and JAK2914/+. In addition, both mouse strains display elevated platelets when animals are housed under resting conditions. The hepatic phenotype is phenocopied by Leptin Receptor null mice that are hyperphagic, poorly cold-adapted, sterile and have enhanced fat conversion resulting in lipidosis. In conclusion, a sensitized screen has shown that JAK2 regulates the response to the chemotherapeutic drug, 5-fluorouracil. These findings have significance to potential myelosuppressive effects of the clinical use of 5-FU in colorectal and pancreatic cancer. Disclosures: No relevant conflicts of interest to declare.

Fetched live from OpenAlex and de-inverted. Abstracts are not stored in this database: the inverted indexes are 8.6 GB of the frame’s 9.3 GB of text, and the host has 13 GB free.

How this classification was reachedexpand

Full frame machine prediction

Teacher imitation

Not calibrated prevalence, not ground truth. Human validation pending. The Gemma side is a direct model label for every work in the frame, read from the title-only record. The Codex side is a classifier learned from the 10,348 direct Codex labels and calibrated to design-weighted sample rates; fields without enough sample support carry no Codex call. Candidate is the union of the two sides; consensus is their intersection. These outputs are machine_predicted_unvalidated and are not human labels.

metaresearch head score (Codex)0.000
metaresearch head score (Gemma)0.000
Version: metacan-v3-hybrid-931329e0061cValidation status: machine_predicted_unvalidated
Candidate categoriesnone
Consensus categoriesnone
DomainCandidate signal: none · Consensus signal: none
Study designCandidate signal: Bench or experimental · Consensus signal: Bench or experimental
GenreCandidate signal: Empirical · Consensus signal: Empirical
Teacher disagreement score0.003
Threshold uncertainty score0.010

Distilled classifier scores by category (both heads)

CategoryCodexGemma
Metaresearch0.0000.000
Meta-epidemiology (narrow)0.0010.000
Meta-epidemiology (broad)0.0000.000
Bibliometrics0.0000.000
Science and technology studies0.0000.000
Scholarly communication0.0000.000
Open science0.0000.000
Research integrity0.0010.000
Insufficient payload (model declined to judge)0.0030.001

Machine scores (provisional)

The two teacher heads of the student model, read on this work. A score orders the frame for review; it never asserts a category, and the validation status ships verbatim with every row.

Baseline scores from an immature model (maturity gate not passed, 7 training rounds). Scores rank; they never assert a category.

Opus teacher head0.016
GPT teacher head0.255
Teacher spread0.238 · how far apart the two teachers sit on this one work
Validation statusscore_only:v0-immature-baseline · verbatim from the scoring run: score_only means the number may rank works, and no category label ships from it

Classification

machine, unvalidated

Machine predicted; a candidate call from one source (direct Gemma or distilled Codex), not a consensus.

The models applied no category: nothing in the taxonomy fit this work.
Study designBench or experimental
Domainnot available
GenreEmpirical

How this classification was reached, model by model and score by score, is at the end of the page under "How this classification was reached".

Quick stats

Citations0
Published2009
Admission routes1
Has abstractyes

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