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Record W2558059667 · doi:10.5539/jmbr.v6n1p121

Application of PCR in the Detection of Aflatoxinogenic and Non-aflatoxinogenic Strains of Aspergillus Flavus Group of Cattle Feed Isolated in Iran

2016· article· en· W2558059667 on OpenAlexvenueno aff
Sepideh Rahimi, Noshin Sohrabi, Mohammad Ali Ebrahimi, Majid Tebyanian, Morteza Taghi zadeh, Sahar Rahimi

Bibliographic record

VenueJournal of Molecular Biology Research · 2016
Typearticle
Languageen
FieldAgricultural and Biological Sciences
TopicMycotoxins in Agriculture and Food
Canadian institutionsnot available
Fundersnot available
KeywordsAspergillus flavusAflatoxinMycotoxinAspergillusBiologyMicrobiologyAspergillus parasiticusFood science

Abstract

fetched live from OpenAlex

Aflatoxins are among the most important Mycotoxins that are mainly produced by various Aspergillus species, specially Aspergillus flavus and Aspergillus parasiticus. Aflatoxins are carcinogenetic and immunosuppressive, so that can lead to acute liver damage, cirrhosis of the liver and hepatocarcinoma induction. Consuming the feed contaminated by Aspergillus puts humans and animals under the danger of Aflatoxins that are considered as an important threats for human and animal health. The purpose of the present study was to make distinction between Aflatoxinogenetic and non-Aflatoxinogenetic strains and Aspergillus Flavus using PCR and TLC and the expression of five Aflatoxin biosynthesis genes including aflD (nor-1), aflP( omtA), aflO (omtB), aflQ(ordA), aflR in 40 strains was investigated using PCR. In this study, a number of 40 Aspergillus flavus strains from 67 species of cattle feed from 21 industrial warehouses of various areas of Tehran and Alborz were used. After isolation and culture in exclusive environment of yeast extract of sucrose agar, the isolated Aspergillus strains were investigated by microscopic and macroscopic methods. In order to make distinction between Aflatoxinogenetic and non-Aflatoxinogenetic strains, PCR method and TLC techniques were used. The results showed that only 7 strains (1, 3, 5, 14, 22, 34, and 38) were Aflatoxin-producers fungi and the rest 33 samples were non-Afatoxin-producers fungi. Since Aspergillus flavus is the main contaminator of cattle feed, there is a need to develop a simple, rapid and sensitive method to identify Aflatoxigenetic fungi, particularly between Aflatoxinogenetic and non-Aflatoxinogenetic strains of AF.

Fetched live from OpenAlex and de-inverted. Abstracts are not stored in this database: the inverted indexes are 8.6 GB of the frame’s 9.3 GB of text, and the host has 13 GB free.

How this classification was reachedexpand

Full frame machine prediction

Teacher imitation

Not calibrated prevalence, not ground truth. Human validation pending. The Gemma side is a direct model label for every work in the frame, read from the title-only record. The Codex side is a classifier learned from the 10,348 direct Codex labels and calibrated to design-weighted sample rates; fields without enough sample support carry no Codex call. Candidate is the union of the two sides; consensus is their intersection. These outputs are machine_predicted_unvalidated and are not human labels.

metaresearch head score (Codex)0.001
metaresearch head score (Gemma)0.001
Version: metacan-v3-hybrid-931329e0061cValidation status: machine_predicted_unvalidated
Candidate categoriesnone
Consensus categoriesnone
DomainCandidate signal: none · Consensus signal: none
Study designCandidate signal: Bench or experimental · Consensus signal: Bench or experimental
GenreCandidate signal: Empirical · Consensus signal: Empirical
Teacher disagreement score0.004
Threshold uncertainty score0.008

Distilled classifier scores by category (both heads)

CategoryCodexGemma
Metaresearch0.0010.001
Meta-epidemiology (narrow)0.0010.000
Meta-epidemiology (broad)0.0000.001
Bibliometrics0.0020.001
Science and technology studies0.0000.001
Scholarly communication0.0010.000
Open science0.0000.000
Research integrity0.0010.001
Insufficient payload (model declined to judge)0.0000.000

Machine scores (provisional)

The two teacher heads of the student model, read on this work. A score orders the frame for review; it never asserts a category, and the validation status ships verbatim with every row.

Baseline scores from an immature model (maturity gate not passed, 7 training rounds). Scores rank; they never assert a category.

Opus teacher head0.026
GPT teacher head0.293
Teacher spread0.268 · how far apart the two teachers sit on this one work
Validation statusscore_only:v0-immature-baseline · verbatim from the scoring run: score_only means the number may rank works, and no category label ships from it

Classification

machine, unvalidated

Machine predicted; a candidate call from one source (direct Gemma or distilled Codex), not a consensus.

The models applied no category: nothing in the taxonomy fit this work.
Study designBench or experimental
Domainnot available
GenreEmpirical

How this classification was reached, model by model and score by score, is at the end of the page under "How this classification was reached".

Quick stats

Citations6
Published2016
Admission routes1
Has abstractyes

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