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Record W2558334814 · doi:10.1093/ofid/ofw172.220

How Frequently Does Hospitalization of Patients Colonized With Carbapenemase-Producing Enterobacteriaceae Result in Contamination of Hospital Sink Drains?

2016· article· en· W2558334814 on OpenAlexaffabout
Lorraine Maze Dit Mieusement, Allison McGeer, Barbara Willey

Bibliographic record

VenueOpen Forum Infectious Diseases · 2016
Typearticle
Languageen
FieldMedicine
TopicMycobacterium research and diagnosis
Canadian institutionsUniversity Health NetworkUniversity of TorontoMount Sinai Hospital
Fundersnot available
KeywordsMedicineContaminationEnterobacteriaceaeCarbapenem-resistant enterobacteriaceaeSink (geography)MicrobiologyEnterobacteriaceae InfectionsEmergency medicineIntensive care medicineBiologyEscherichia coliEcologyGeography

Abstract

fetched live from OpenAlex

Background. There is growing evidence that hospital sinks and drains may be reservoirs for Gram-negative bacteria, which can be transmitted to patients. A report from Toronto implicating a sink drain in transmission of carbapenemase-producing Enterobacteriaceae (CPE) to a hospitalized patient led us to systematically culture sinks after they were exposed to patients colonized with CPE. Methods. At Mount Sinai Hospital (MSH), patients with risk factors for CPE are screened for colonization on admission with rectal swabs. Patients identified as colonized/infected with CPE are managed in private rooms with contact precautions and additional environmental disinfection. Beginning in 2013, we swabbed sink drains and overflows in rooms in which a patient with CPE had been present. Results. From October 2007 to May 2016, 18 patients colonized/infected with CPE have been identified at MSH (some with multiple strains/organisms); 16 were hospitalized including 1 who acquired CPE in hospital. There were 7 Klebsiella spp. (1 KPC, 1 OXA48, 1 NDM, 2 VIM, 2 OXA48 + NDM); 6 E. coli (3 OXA48, 2 NDM, 1 KPC); 3 E. cloacae (1 KPC, 1 VIM, 1 NMC); and 4 other (1 KPC, 1 NDM, 1 VIM, 1 OXA24 + OXA143). Since 2013, 14 hospitalized cases resulted in the exposure of 39 sinks to CPE. Swabs of five (12.8%) of these sinks, exposed to 3 different cases yielded CPE after discharge cleaning [3 E. coli (2 KPC, 1 OXA48); 1 E. cloacae (KPC); and 1 Klebsiella spp. (VIM)]. In all cases, the organism and the enzyme from the sink matched that of the patient previously admitted to the room. The median room exposure was 9 days (range 2–76) for patients whose sinks became contaminated, and 5 days (range 1–81) for patients whose sinks were negative for CPE on discharge (P = 0.56). Targeted cleaning of drains and was not successful in removing CPE. In three cases, removal of the sink drain from outlet to wall resulted in subsequent cultures from the sink being negative. In one sink with an overflow, replacement of the sink was also required before negative cultures were achieved. Another sink with an overflow remained culture negative after steam cleaning. Conclusion. In our hospital, 13% of sink drains were contaminated after exposure to CPE colonized patients. Procedures to protect hospital drains from CPE contamination are needed. Disclosures. All authors: No reported disclosures.

Fetched live from OpenAlex and de-inverted. Abstracts are not stored in this database: the inverted indexes are 8.6 GB of the frame’s 9.3 GB of text, and the host has 13 GB free.

How this classification was reachedexpand

Full frame machine prediction

Teacher imitation

Not calibrated prevalence, not ground truth. Human validation pending. The Gemma side is a direct model label for every work in the frame, read from the title-only record. The Codex side is a classifier learned from the 10,348 direct Codex labels and calibrated to design-weighted sample rates; fields without enough sample support carry no Codex call. Candidate is the union of the two sides; consensus is their intersection. These outputs are machine_predicted_unvalidated and are not human labels.

metaresearch head score (Codex)0.001
metaresearch head score (Gemma)0.013
Version: metacan-v3-hybrid-931329e0061cValidation status: machine_predicted_unvalidated
Candidate categoriesnone
Consensus categoriesnone
DomainCandidate signal: none · Consensus signal: none
Study designCandidate signal: Observational · Consensus signal: Observational
GenreCandidate signal: Empirical · Consensus signal: Empirical
Teacher disagreement score0.007
Threshold uncertainty score0.015

Distilled classifier scores by category (both heads)

CategoryCodexGemma
Metaresearch0.0010.013
Meta-epidemiology (narrow)0.0000.000
Meta-epidemiology (broad)0.0000.001
Bibliometrics0.0010.001
Science and technology studies0.0010.001
Scholarly communication0.0010.002
Open science0.0010.000
Research integrity0.0020.001
Insufficient payload (model declined to judge)0.0020.001

Machine scores (provisional)

The two teacher heads of the student model, read on this work. A score orders the frame for review; it never asserts a category, and the validation status ships verbatim with every row.

Baseline scores from an immature model (maturity gate not passed, 7 training rounds). Scores rank; they never assert a category.

Opus teacher head0.006
GPT teacher head0.241
Teacher spread0.235 · how far apart the two teachers sit on this one work
Validation statusscore_only:v0-immature-baseline · verbatim from the scoring run: score_only means the number may rank works, and no category label ships from it

Classification

machine, unvalidated

Machine predicted; a candidate call from one source (direct Gemma or distilled Codex), not a consensus.

The models applied no category: nothing in the taxonomy fit this work.
Study designObservational
Domainnot available
GenreEmpirical

How this classification was reached, model by model and score by score, is at the end of the page under "How this classification was reached".

Quick stats

Citations0
Published2016
Admission routes2
Has abstractyes

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