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Record W2560653852 · doi:10.1093/biolreprod/77.s1.239b

NO DIFFERENCE BETWEEN COLLAGENASE TYPE I AND IV IN ISOLATION OF PORCINE TESTIS CELLS

2007· article· en· W2560653852 on OpenAlexaff
Yanfei Yang, Ali Honaramooz

Bibliographic record

VenueBiology of Reproduction · 2007
Typearticle
Languageen
FieldMedicine
TopicSperm and Testicular Function
Canadian institutionsUniversity of Saskatchewan
Fundersnot available
KeywordsCollagenaseBiologyAndrologyHyaluronidaseTrypsinFetal bovine serumTrypan blueMolecular biologyDigestion (alchemy)DispaseCellCell cultureAgaroseBiochemistryChromatographyEnzymeChemistry

Abstract

fetched live from OpenAlex

Testicular cell isolation is a starting step for culture, enrichment, modification or transplantation of spermatogonial stem cells. Therefore, the efficiency of enzymatic dissociation of the testis tissue is a potential limiting factor for such stem cell applications. Protocols used for testis cell isolation vary depending on the species from which the testes are collected and among laboratories, and little research has compared the virtue of different protocols. Therefore in search of an optimized protocol, we started by comparing the dissociation efficiency of collagenase type I and IV, as either type has been used in similar protocols. The testes of oneweek old piglets were surgically removed, decapsulated, trimmed, minced and exposed to collagenase (either type I or IV, 0.2% in DMEM) for 30 min to be digested, followed by an additional 20 min digestion with hyaluronidase (0.2% in DMEM). The suspension was then washed (centrifuged at 350X g for 5–7 min and the supernatant was discarded) and a combination of trypsin (0.25%) with EDTA (2.21 mM) and DNase I (0.2%) in HBSS was added for 15 min for further digestion, before fetal bovine serum (FBS) was supplied to stop the digestion. The suspension was washed again and resuspended in DMEM with 12% FBS and filtered through a 40 micrometer nylon filter. Cell populations were counted and the cell viability was determined using trypan blue exclusion. Total cell number harvested per gram testicular parenchyma were 332 ± 42 X 106 (mean ± SEM, n = 13) and 335 ± 26 X 106 (mean ± SEM, n = 14), for collagenase type I and IV, respectively, displaying no significant difference. Cell viability rates were 78 ± 2% (mean ± SEM, n = 13) and 83 ± 2% (mean ± SEM, n = 14) for collagenase type I and IV, respectively, showing no significant difference (p = 0.1). These results show that in terms of the viability and cellular yield, collagenase type I and IV are equally efficient; however, our observations of the final populations of isolated cells seemed to suggest that collagenase type IV resulted in far fewer cell clusters than collagenase type I. Further research is required to evaluate the stem cell activity of the cell populations obtained from each protocol. (poster)

Fetched live from OpenAlex and de-inverted. Abstracts are not stored in this database: the inverted indexes are 8.6 GB of the frame’s 9.3 GB of text, and the host has 13 GB free.

How this classification was reachedexpand

Full frame machine prediction

Teacher imitation

Not calibrated prevalence, not ground truth. Human validation pending. The Gemma side is a direct model label for every work in the frame, read from the title-only record. The Codex side is a classifier learned from the 10,348 direct Codex labels and calibrated to design-weighted sample rates; fields without enough sample support carry no Codex call. Candidate is the union of the two sides; consensus is their intersection. These outputs are machine_predicted_unvalidated and are not human labels.

metaresearch head score (Codex)0.001
metaresearch head score (Gemma)0.001
Version: metacan-v3-hybrid-931329e0061cValidation status: machine_predicted_unvalidated
Candidate categoriesnone
Consensus categoriesnone
DomainCandidate signal: none · Consensus signal: none
Study designCandidate signal: Bench or experimental · Consensus signal: Bench or experimental
GenreCandidate signal: Empirical · Consensus signal: Empirical
Teacher disagreement score0.002
Threshold uncertainty score0.006

Distilled classifier scores by category (both heads)

CategoryCodexGemma
Metaresearch0.0010.001
Meta-epidemiology (narrow)0.0000.000
Meta-epidemiology (broad)0.0000.000
Bibliometrics0.0000.000
Science and technology studies0.0000.000
Scholarly communication0.0010.000
Open science0.0000.000
Research integrity0.0000.001
Insufficient payload (model declined to judge)0.0020.001

Machine scores (provisional)

The two teacher heads of the student model, read on this work. A score orders the frame for review; it never asserts a category, and the validation status ships verbatim with every row.

Baseline scores from an immature model (maturity gate not passed, 7 training rounds). Scores rank; they never assert a category.

Opus teacher head0.024
GPT teacher head0.274
Teacher spread0.250 · how far apart the two teachers sit on this one work
Validation statusscore_only:v0-immature-baseline · verbatim from the scoring run: score_only means the number may rank works, and no category label ships from it

Classification

machine, unvalidated

Machine predicted; a candidate call from one source (direct Gemma or distilled Codex), not a consensus.

The models applied no category: nothing in the taxonomy fit this work.
Study designBench or experimental
Domainnot available
GenreEmpirical

How this classification was reached, model by model and score by score, is at the end of the page under "How this classification was reached".

Quick stats

Citations0
Published2007
Admission routes1
Has abstractyes

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