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Zinc Enhances the Protection of Fibrin-Bound Thrombin from Antithro Inhibition.

2007· article· en· W2560676248 on OpenAlexaff
Howard H.W. Chan, Alan R. Stafford, Beverly A. Leslie, James C. Fredenburgh, Jeffrey I. Weitz

Bibliographic record

VenueBlood · 2007
Typearticle
Languageen
FieldMedicine
TopicBlood properties and coagulation
Canadian institutionsMcMaster University
Fundersnot available
KeywordsChemistryTernary complexFibrinThrombinAntithrombinBinding siteFibrinogenHeparinMolecular biologyBiophysicsBiochemistryStereochemistryEnzymePlateletImmunologyBiology

Abstract

fetched live from OpenAlex

Abstract Introduction: Unfractionated heparin (UFH) binds to thrombin (IIa), which bridges IIa to antithrombin (AT) and promotes inhibition. UFH also binds fibrin (Fn) and, by bridging IIa onto Fn, promotes the formation of a ternary UFH-IIa-Fn complex that protects IIa from AT inactivation. Within this ternary complex, UFH binds to exosite 2 on IIa, whereas Fn binds to exosite 1. γ′-fibrinogen (γ′-Fg), which comprises about 10% of circulating Fg, is a variant with an extended γ-chain. Because IIa binds to the γ′ chain via exosite 2, IIa binds γ′-Fn with higher affinity than it does to the bulk γA-Fn. Zinc (Zn) binds both Fn and UFH. Accordingly, we examined the possibility that Zn promotes the formation of the UFH-IIa-Fn complex, thereby increasing the protection of IIa from AT inhibition. Methods: The affinity of 125I-labelled UFH for γ A-Fn was obtained by measuring unbound UFH in the supernatant after γ A-fg was clotted with IIa in the absence or presence of Zn. Similarly, the affinity of IIa for γA- or γ′-Fn was determined by quantifying the chromogenic activity of unbound IIa in the supernatants of clots prepared from γA- or γ′-Fg with or without Zn and UFH. Rate constants of IIa inhibition by AT were determined under pseudo-first order conditions in the absence or presence of soluble fibrin monomer (Fm) prepared from γA- or γ′-Fg. Results: UFH binds γA-fibrin with 4-fold higher affinity in the presence of 12.5 μM Zn than in its absence (Kd values of 0.4 and 1.5 μM, respectively). Therefore, Zn enhances the affinity of UFH for γA-Fn. Likewise, the affinity of IIa for γA-Fn was 3-fold higher in the presence of UFH than in its absence (Kd values of 0.8 and 2.6 μM, respectively). Zn produced an additional 4-fold increase in affinity in the presence of UFH (Kd value of 0.2 μM), but had no effect on IIa binding in its absence. These data suggest that, by heightening the affinity of UFH for γA-Fn, Zn enhances the formation of a UFH-IIa complex with γA-Fn. In contrast, IIa binds γ′-Fn with high affinity (Kd 0.1 μM), and this interaction was unaffected by UFH or Zn. The heparin-catalyzed rate of IIa inhibition by AT was 2 ± 0.2 × 108 M−1 min−1. Using a concentration of γA-Fm that reduced this rate by 25%, the addition of Zn produced an additional 30% reduction in the rate. Contrarily, an equivalent concentration of γ′-Fm reduced the rate by 60%, and there was no further reduction with the addition of Zn. Conclusion: Physiological concentrations of Zn enhance the formation of the UFH-IIa-Fn complex with γA-Fn, thereby increasing the protection of Fn-bound IIa from inhibition by AT. Zn has no effect on ternary complex formation with γ′-Fn, which already binds IIa with high affinity and affords IIa with greater protection than γA-Fn. These findings suggest that the extent of protection of Fn-bound IIa from inhibition by the AT-UFH complex is greater than previously suspected. Because Fn-bound IIa can trigger thrombus growth, its resistance to inhibition helps to explain the limitations of UFH in patients with arterial thrombosis.

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How this classification was reachedexpand

Full frame distilled prediction

Teacher imitation

Not calibrated prevalence, not ground truth. Human validation pending. Learned from the 10,348 direct Codex labels and 10,348 direct Gemma labels. Candidate is the union of thresholded teacher heads; consensus is their intersection. These outputs are machine_predicted_unvalidated and are not human labels or direct frontier model labels.

metaresearch head score (Codex)0.000
metaresearch head score (Gemma)0.000
Version: codex-gemma-dda1882f352aValidation status: machine_predicted_unvalidated
Candidate categoriesnone
Consensus categoriesnone
DomainCandidate signal: none · Consensus signal: none
Study designCandidate signal: Bench or experimental · Consensus signal: Bench or experimental
GenreCandidate signal: Empirical · Consensus signal: Empirical
Teacher disagreement score0.106
Threshold uncertainty score0.179

Codex and Gemma teacher scores by category

CategoryCodexGemma
Metaresearch0.0000.000
Meta-epidemiology (narrow)0.0000.000
Meta-epidemiology (broad)0.0000.000
Bibliometrics0.0000.000
Science and technology studies0.0000.000
Scholarly communication0.0000.000
Open science0.0000.000
Research integrity0.0000.000
Insufficient payload (model declined to judge)0.0000.000

Machine scores (provisional)

The two teacher heads of the student model, read on this work. A score orders the frame for review; it never asserts a category, and the validation status ships verbatim with every row.

Baseline scores from an immature model (maturity gate not passed, 7 training rounds). Scores rank; they never assert a category.

Opus teacher head0.021
GPT teacher head0.246
Teacher spread0.224 · how far apart the two teachers sit on this one work
Validation statusscore_only:v0-immature-baseline · verbatim from the scoring run: score_only means the number may rank works, and no category label ships from it

Classification

machine, unvalidated

Machine predicted; a candidate call from one teacher head, not a consensus.

The models applied no category: nothing in the taxonomy fit this work.
Study designBench or experimental
Domainnot available
GenreEmpirical

How this classification was reached, model by model and score by score, is at the end of the page under "How this classification was reached".

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Citations1
Published2007
Admission routes1
Has abstractyes

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