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Record W2562886398 · doi:10.1080/07060661.2016.1262901

Virulence of isolates of <i>Ustilago tritici</i> collected in Manitoba and Saskatchewan, Canada, from 1999 to 2007

2016· article· en· W2562886398 on OpenAlexaffvenueabout
J. G. Menzies

Bibliographic record

VenueCanadian Journal of Plant Pathology · 2016
Typearticle
Languageen
FieldAgricultural and Biological Sciences
TopicWheat and Barley Genetics and Pathology
Canadian institutionsAgriculture and Agri-Food Canada
Fundersnot available
KeywordsVirulenceBiologyInoculationPathogenHost (biology)PopulationVeterinary medicineAnthesisCultivarAgronomyMicrobiologyHorticultureGeneticsGeneMedicine

Abstract

fetched live from OpenAlex

Breeding for resistance to the loose smut pathogen, Ustilago tritici, in wheat is a traditional disease management approach in western Canada. The development of resistant wheat lines relies on accurate methods for identification of effective host resistance. Knowledge of the virulence frequencies of races in the pathogen population is essential to identify effective host resistance. The objective of this work was to characterize the virulence phenotypes of U. tritici isolates collected from 1999 to 2007 in Manitoba and Saskatchewan. Sixty-four isolates of U. tritici from durum wheat and 59 from hexaploid wheat were assessed for virulence. Teliospore suspensions of each isolate were injected into florets of the wheat differential host series by needle inoculation at mid-anthesis. Mature seed from inoculated florets were grown to determine the per cent infected plants. Eighty-five per cent of durum wheat isolates were race T32, possessing virulence to differential lines ‘Mindum’ (TD-1), and ‘Wakooma’ (TD-19). Virulence to ‘Pentad’ (TD-11) was found in only 5% of the durum wheat isolates. Races T7, T5, T64 and T10 were the most commonly identified races from the hexaploid wheat isolates of U. tritici. Six previously unreported races were identified: races T61, T64, T65, T66, T67 and T68. None of the isolates possessed virulence to ‘Sonop’ (TD-14), while >50% of the isolates possessed virulence to ‘Kota’ (TD-4), ‘Little Club’/‘Reward’ (TD-5A), ‘Reward’ (TD-7) and ‘Thatcher’/‘Regent’/‘Reward’ (TD-12A). Virulence to TD-6, which was previously uncommon from Manitoba and Saskatchewan, was possessed by 20% of the hexaploid wheat isolates. The natural population of U. tritici in Manitoba and Saskatchewan continues to evolve in terms of virulence, but effective sources of resistance are still currently available.

Fetched live from OpenAlex and de-inverted. Abstracts are not stored in this database: the inverted indexes are 8.6 GB of the frame’s 9.3 GB of text, and the host has 13 GB free.

How this classification was reachedexpand

Full frame machine prediction

Teacher imitation

Not calibrated prevalence, not ground truth. Human validation pending. The Gemma side is a direct model label for every work in the frame, read from the title-only record. The Codex side is a classifier learned from the 10,348 direct Codex labels and calibrated to design-weighted sample rates; fields without enough sample support carry no Codex call. Candidate is the union of the two sides; consensus is their intersection. These outputs are machine_predicted_unvalidated and are not human labels.

metaresearch head score (Codex)0.000
metaresearch head score (Gemma)0.000
Version: metacan-v3-hybrid-931329e0061cValidation status: machine_predicted_unvalidated
Candidate categoriesnone
Consensus categoriesnone
DomainCandidate signal: none · Consensus signal: none
Study designCandidate signal: Observational · Consensus signal: Observational
GenreCandidate signal: Empirical · Consensus signal: Empirical
Teacher disagreement score0.158
Threshold uncertainty score0.318

Distilled classifier scores by category (both heads)

CategoryCodexGemma
Metaresearch0.0000.000
Meta-epidemiology (narrow)0.0010.000
Meta-epidemiology (broad)0.0000.000
Bibliometrics0.0010.002
Science and technology studies0.0010.000
Scholarly communication0.0010.000
Open science0.0000.000
Research integrity0.0000.000
Insufficient payload (model declined to judge)0.0010.000

Machine scores (provisional)

The two teacher heads of the student model, read on this work. A score orders the frame for review; it never asserts a category, and the validation status ships verbatim with every row.

Baseline scores from an immature model (maturity gate not passed, 7 training rounds). Scores rank; they never assert a category.

Opus teacher head0.010
GPT teacher head0.169
Teacher spread0.159 · how far apart the two teachers sit on this one work
Validation statusscore_only:v0-immature-baseline · verbatim from the scoring run: score_only means the number may rank works, and no category label ships from it

Classification

machine, unvalidated

Machine predicted; a candidate call from one source (direct Gemma or distilled Codex), not a consensus.

The models applied no category: nothing in the taxonomy fit this work.
Study designObservational
Domainnot available
GenreEmpirical

How this classification was reached, model by model and score by score, is at the end of the page under "How this classification was reached".

Quick stats

Citations6
Published2016
Admission routes3
Has abstractyes

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