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Record W2565520591 · doi:10.1139/cjps-2016-0213

Ferric reduction oxidase 2 gene from Pyrus betulifolia is regulated by iron deficiency and auxin

2016· article· en· W2565520591 on OpenAlexvenueno aff
Xiaoguang Li, Ying Gao, Qingqing Jian, Zhao Zhang, Shuilin Liu, Fengyun Chen, Jianguang Zhang

Bibliographic record

VenueCanadian Journal of Plant Science · 2016
Typearticle
Languageen
FieldAgricultural and Biological Sciences
TopicPlant Micronutrient Interactions and Effects
Canadian institutionsnot available
Fundersnot available
KeywordsOpen reading frameGeneBiologyGene expressionFerricReductaseBiochemistryHomology (biology)Oxidase testIron deficiencyGeneticsChemistryPeptide sequenceEnzyme

Abstract

fetched live from OpenAlex

Pyrus betulifolia Bunge belongs to the woody plant family and is an ideal model for studying molecular strategies of iron acquisition and metabolism in strategy I plants. Using polymerase chain reaction amplification technology, a gene encoding a putative ferric chelate reductase (FCR) protein was isolated from P. betulifolia and designated as PbFRO2. This gene was 2166 bp in length with an open reading frame encoding a protein of 721 amino acids. A hidden Markov model for topology prediction of PbFRO2 suggested that there were 10 transmembrane regions (I–X) connected by nine loops. Phylogenetic analyses demonstrated that PbFRO2 had the highest homology with Malus xiaojinensis Cheng & Jiang. Iron starvation induced significant increase in root FCR activity and PbFRO2 expression. The split-root experiment demonstrated that Fe limitation in one portion of the root system triggered significant up-regulation of the PbFRO2 expression in the Fe-sufficient part, suggesting that the PbFRO2 expression was induced by systemic signals. Furthermore, the addition of α-naphthaleneacetic acid was found to strengthen the Fe deficiency-caused up-regulation of the PbFRO2 expression in the roots. By contrast, 1-naphthylphthalamic acid application blocked up-regulation of the PbFRO2 expression. The results indicated that Fe deficiency-induced alterations of the PbFRO2 expression were mediated by auxin.

Fetched live from OpenAlex and de-inverted. Abstracts are not stored in this database: the inverted indexes are 8.6 GB of the frame’s 9.3 GB of text, and the host has 13 GB free.

How this classification was reachedexpand

Full frame distilled prediction

Teacher imitation

Not calibrated prevalence, not ground truth. Human validation pending. Learned from the 10,348 direct Codex labels and 10,348 direct Gemma labels. Candidate is the union of thresholded teacher heads; consensus is their intersection. These outputs are machine_predicted_unvalidated and are not human labels or direct frontier model labels.

metaresearch head score (Codex)0.000
metaresearch head score (Gemma)0.000
Version: codex-gemma-dda1882f352aValidation status: machine_predicted_unvalidated
Candidate categoriesnone
Consensus categoriesnone
DomainCandidate signal: none · Consensus signal: none
Study designCandidate signal: Bench or experimental · Consensus signal: Bench or experimental
GenreCandidate signal: Empirical · Consensus signal: Empirical
Teacher disagreement score0.271
Threshold uncertainty score0.999

Codex and Gemma teacher scores by category

CategoryCodexGemma
Metaresearch0.0000.000
Meta-epidemiology (narrow)0.0000.000
Meta-epidemiology (broad)0.0000.000
Bibliometrics0.0000.000
Science and technology studies0.0000.000
Scholarly communication0.0000.000
Open science0.0000.000
Research integrity0.0000.000
Insufficient payload (model declined to judge)0.0000.000

Machine scores (provisional)

The two teacher heads of the student model, read on this work. A score orders the frame for review; it never asserts a category, and the validation status ships verbatim with every row.

Baseline scores from an immature model (maturity gate not passed, 7 training rounds). Scores rank; they never assert a category.

Opus teacher head0.009
GPT teacher head0.179
Teacher spread0.170 · how far apart the two teachers sit on this one work
Validation statusscore_only:v0-immature-baseline · verbatim from the scoring run: score_only means the number may rank works, and no category label ships from it

Classification

machine, unvalidated

Machine predicted; a candidate call from one teacher head, not a consensus.

The models applied no category: nothing in the taxonomy fit this work.
Study designBench or experimental
Domainnot available
GenreEmpirical

How this classification was reached, model by model and score by score, is at the end of the page under "How this classification was reached".

Quick stats

Citations4
Published2016
Admission routes1
Has abstractyes

Explore more

Same venueCanadian Journal of Plant ScienceSame topicPlant Micronutrient Interactions and EffectsFrench-language works237,207