MétaCan
Menu
Back to cohort
Record W2584940462 · doi:10.1016/j.ymgme.2016.11.284

Combined deficiencies of endosomal ganglioside neuraminidases 3 and 4 in mice cause lysosomal GM3 gangliosidosis

2017· article· en· W2584940462 on OpenAlexaff
Alexey V. Pshezhetsky, Xuefang Pan, Camila De Britto Pará De Aragão, Juan Velasco-Martin, David Priestman, Frances M. Platt, Nathalie Lamarche‐Vane, Carlos R. Morales, Taeko Miyagi

Bibliographic record

VenueMolecular Genetics and Metabolism · 2017
Typearticle
Languageen
FieldBiochemistry, Genetics and Molecular Biology
TopicGlycosylation and Glycoproteins Research
Canadian institutionsMcGill UniversityUniversité de MontréalCentre Hospitalier Universitaire Sainte-Justine
Fundersnot available
KeywordsExome sequencingPtosisPhenotypeBiologyIntellectual disabilityGeneticsExonGene

Abstract

fetched live from OpenAlex

By regulating recognition, signaling and physiology of neurons, gangliosides are essential to CNS function.The composition of gangliosides in the brain changes during development and aging being regulated by neuraminidases presumably, which cleave their terminal sialic acid residues.Two mammalian neuraminidases, Neu3 and Neu4 are major candidates for processing brain gangliosides, however, the corresponding knockout mice showed no changes in brain ganglioside metabolism or deficits in brain function.To elucidate the physiological functions of Neu4 and Neu3 in the brain, we generated a gene-targeted mouse strain devoid of both enzymes.At the age of 10 months the mice showed deficits in spatial and short-term memory, whereas neuraminidase activity against gangliosides in their brain tissues was below detection levels.GM3 ganglioside was stored in lysosomes of neurons, microglia and vascular pericytes and GM1-ganglioside decreased in the axons.The number of astrocytes and activated microglia was increased, consistent with neuroinflammation.Cultured hippocampal and cortical neurons also showed reduced levels of GM1 ganglioside in the axons and impaired neuritogenesis.Our data provide evidence that Neu3 and Neu4 have unique roles in the regulation of brain ganglioside composition essential for CNS function: Neu4 generates the neuronal GM1 necessary for axon growth whereas Neu3 catabolizes GM3.

Fetched live from OpenAlex and de-inverted. Abstracts are not stored in this database: the inverted indexes are 8.6 GB of the frame’s 9.3 GB of text, and the host has 13 GB free.

How this classification was reachedexpand

Full frame machine prediction

Teacher imitation

Not calibrated prevalence, not ground truth. Human validation pending. The Gemma side is a direct model label for every work in the frame, read from the title-only record. The Codex side is a classifier learned from the 10,348 direct Codex labels and calibrated to design-weighted sample rates; fields without enough sample support carry no Codex call. Candidate is the union of the two sides; consensus is their intersection. These outputs are machine_predicted_unvalidated and are not human labels.

metaresearch head score (Codex)0.000
metaresearch head score (Gemma)0.001
Version: metacan-v3-hybrid-931329e0061cValidation status: machine_predicted_unvalidated
Candidate categoriesnone
Consensus categoriesnone
DomainCandidate signal: none · Consensus signal: none
Study designCandidate signal: Bench or experimental · Consensus signal: Bench or experimental
GenreCandidate signal: Empirical · Consensus signal: Empirical
Teacher disagreement score0.004
Threshold uncertainty score0.015

Distilled classifier scores by category (both heads)

CategoryCodexGemma
Metaresearch0.0000.001
Meta-epidemiology (narrow)0.0030.001
Meta-epidemiology (broad)0.0010.001
Bibliometrics0.0040.001
Science and technology studies0.0010.002
Scholarly communication0.0010.001
Open science0.0010.001
Research integrity0.0020.002
Insufficient payload (model declined to judge)0.0040.002

Machine scores (provisional)

The two teacher heads of the student model, read on this work. A score orders the frame for review; it never asserts a category, and the validation status ships verbatim with every row.

Baseline scores from an immature model (maturity gate not passed, 7 training rounds). Scores rank; they never assert a category.

Opus teacher head0.015
GPT teacher head0.273
Teacher spread0.257 · how far apart the two teachers sit on this one work
Validation statusscore_only:v0-immature-baseline · verbatim from the scoring run: score_only means the number may rank works, and no category label ships from it

Classification

machine, unvalidated

Machine predicted; a candidate call from one source (direct Gemma or distilled Codex), not a consensus.

The models applied no category: nothing in the taxonomy fit this work.
Study designBench or experimental
Domainnot available
GenreEmpirical

How this classification was reached, model by model and score by score, is at the end of the page under "How this classification was reached".

Quick stats

Citations0
Published2017
Admission routes1
Has abstractno

Explore more

Same venueMolecular Genetics and MetabolismSame topicGlycosylation and Glycoproteins ResearchFrench-language works237,207