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The Leukemogenic Potential of the NUP98-PMX1 Fusion Protein Is Independent of the Known Binding Properties of PMX1 to the Serum Response Factor and the Serum Response Element and Requires the NUP98 Sequences.

2004· article· en· W2586349952 on OpenAlexaff
Koichi Hirose, Nicolas Pineault, R. Keith Humphries

Bibliographic record

VenueBlood · 2004
Typearticle
Languageen
FieldBiochemistry, Genetics and Molecular Biology
TopicVirus-based gene therapy research
Canadian institutionsBC Cancer Agency
Fundersnot available
KeywordsBiologyHox geneHomeoboxHaematopoiesisFusion geneFusion proteinMolecular biologySerum Response ElementCancer researchGreen fluorescent proteinTransplantationReporter geneGeneStem cellCell biologySerum response factorGeneticsTranscription factorGene expressionInternal medicineMedicine

Abstract

fetched live from OpenAlex

Abstract The translocation t(1;11)(q23;p15) encoding the NUP98-PMX1(N-PMX1) fusion gene combines the N-terminus of nucleoporin NUP98 with the homeodomain-containing C-terminus of PMX1(Nakamura et al., Blood. 1999 ). A large number of clustered Hox genes (Hox) have been reported to be fused to NUP98, however, N-PMX1 is the only fusion containing a non-clustered homeodomain, raising the intriguing possibility of unique mechanisms underlying its role in leukemia. Indeed, PMX1 was first identified for its role in enhancing the binding of the serum response factor (SRF) to the serum responsive element (SRE). Whether these PMX1 functions are involved in the leukemogenic role of N-PMX1 is not clear. Furthermore, in contrast to Hox genes, PMX1 is not expressed in hematopoietic cells, suggesting that the upregulation of its homeodomain, under the control of the ubiquitous NUP98 promoter, and/or the transcriptional activity of the NUP98 portion may be relevant for the leukemogenicity of N-PMX1. In order to gain insight into the possible unique functions of N-PMX1, we exploited retroviral gene transfer techniques and the murine bone marrow (BM) transplantation model. MSCV based retroviral vectors carrying an IRES linked GFP reporter gene were generated for the full length PMX1 and the N-PMX1 fusion. Lethally irradiated mice were transplanted, two days following transduction, with post 5-FU treated BM cells without preselection. Surprisingly, at 7 months post transplant, PMX1 recipients remained healthy and had normal blood cell parameters, whereas 2 out of 5 mice transplanted with N-PMX1 cells succumbed to AML, as evidenced by elevated white blood counts (202±154 × 106 /ml), anemia (1.39±0.5 × 109 /ml), splenomegaly (0.45±0.01 g) and high myeloid content in BM (>95% Gr1 and/or Mac1+). In all, no hematological abnormalities were observed in mice transplanted with PMX1 cells over a 9 month observation period. These results suggest that the ectopic expression of PMX1 alone in BM cells is not enough to perturb hematopoiesis, and support an essential role for the NUP98 portion of the fusion protein in the leukemogenic activity. In order to further clarify the mechanisms underlying the leukemogenic role of N-PMX1, we first examined its effects in vitro. N-PMX1 transduced BM cells expanded 50 fold more than PMX1 or GFP transduced BM cells after 21 days in liquid culture (n=5), and formed large granulo-macrophage colonies over at least 4 serial replatings in methylcellulose (n=5). Furthermore, as determined in CFU-S assays after 1 week in liquid culture, N-PMX1 increased the number of progenitor cells over 100-fold, whereas PMX1 transduced BM cells behaved as control cells (n=5). These results suggest that the leukemogenic potential of N-PMX1 is mediated by its abilities to block differentiation and promote proliferation and, further, that these effects are unique to the fusion protein. To examine if these abilities were mediated by SRF and SRE, which are known to regulate genes involved in oncogenic processes (e.g c-fos), we engineered strategic mutations reported to selectively eliminate the direct binding of PMX1 to the SRE or its transcription complex forming ability with SRF. Unexpectedly, these mutants had almost equivalent potency to block differentiation and promote proliferation with native N-PMX1. Together, these results indicate that different, as yet unknown PMX1 functions are crucial for N-PMX-mediated AML.

Fetched live from OpenAlex and de-inverted. Abstracts are not stored in this database: the inverted indexes are 8.6 GB of the frame’s 9.3 GB of text, and the host has 13 GB free.

How this classification was reachedexpand

Full frame machine prediction

Teacher imitation

Not calibrated prevalence, not ground truth. Human validation pending. The Gemma side is a direct model label for every work in the frame, read from the title-only record. The Codex side is a classifier learned from the 10,348 direct Codex labels and calibrated to design-weighted sample rates; fields without enough sample support carry no Codex call. Candidate is the union of the two sides; consensus is their intersection. These outputs are machine_predicted_unvalidated and are not human labels.

metaresearch head score (Codex)0.000
metaresearch head score (Gemma)0.000
Version: metacan-v3-hybrid-931329e0061cValidation status: machine_predicted_unvalidated
Candidate categoriesnone
Consensus categoriesnone
DomainCandidate signal: none · Consensus signal: none
Study designCandidate signal: Bench or experimental · Consensus signal: Bench or experimental
GenreCandidate signal: Empirical · Consensus signal: Empirical
Teacher disagreement score0.002
Threshold uncertainty score0.006

Distilled classifier scores by category (both heads)

CategoryCodexGemma
Metaresearch0.0000.000
Meta-epidemiology (narrow)0.0000.000
Meta-epidemiology (broad)0.0000.000
Bibliometrics0.0000.000
Science and technology studies0.0000.000
Scholarly communication0.0000.000
Open science0.0000.000
Research integrity0.0000.001
Insufficient payload (model declined to judge)0.0020.000

Machine scores (provisional)

The two teacher heads of the student model, read on this work. A score orders the frame for review; it never asserts a category, and the validation status ships verbatim with every row.

Baseline scores from an immature model (maturity gate not passed, 7 training rounds). Scores rank; they never assert a category.

Opus teacher head0.014
GPT teacher head0.250
Teacher spread0.236 · how far apart the two teachers sit on this one work
Validation statusscore_only:v0-immature-baseline · verbatim from the scoring run: score_only means the number may rank works, and no category label ships from it

Classification

machine, unvalidated

Machine predicted; a candidate call from one source (direct Gemma or distilled Codex), not a consensus.

The models applied no category: nothing in the taxonomy fit this work.
Study designBench or experimental
Domainnot available
GenreEmpirical

How this classification was reached, model by model and score by score, is at the end of the page under "How this classification was reached".

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Citations0
Published2004
Admission routes1
Has abstractyes

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