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Record W2588056316 · doi:10.1093/neuonc/now212.180

CSIG-19. RECEPTOR TYROSINE KINASE PHOSPHORYLATION IN A MODEL SYSTEM OF GBM

2016· article· en· W2588056316 on OpenAlexaff
Amanda Gerber, Matthaeus Ware, Kaitlin Thomas, Michael Blough, Gregory Cairncross

Bibliographic record

VenueNeuro-Oncology · 2016
Typearticle
Languageen
FieldImmunology and Microbiology
TopicPhagocytosis and Immune Regulation
Canadian institutionsInstitute of Cancer ResearchUniversity of Calgary
Fundersnot available
KeywordsReceptor tyrosine kinasePlatelet-derived growth factor receptorPhosphorylationTyrosine phosphorylationCancer researchGrowth factor receptorTyrosine kinaseReceptor Protein-Tyrosine KinasesBiologyEpidermal growth factor receptorSignal transductionReceptorCell biologyGrowth factorBiochemistry

Abstract

fetched live from OpenAlex

Glioblastoma Multiforme (GBM) is the most common brain tumour in adults, and despite our best treatments is fatal. Multiple receptor tyrosine kinases (RTKs) are amplified in GBM: 45% have elevated expression of Epidermal Growth Factor Receptor (EGFR) and 13% overexpress Platelet Derived Growth Factor Receptor (PDGFR). While the proposed role of RTKs in GBM initiation and maintenance make them attractive therapeutic targets the clinical efficacy of RTK inhibition has been limited: targeting PDGFR has been unsuccessful, and only 10-20% of patients respond incompletely and briefly to EGFR inhibition. Therapeutic advances may be possible if we can understand why these targeted treatments have been ineffective. Using a murine model of PDGF-AA initiated GBM, the role of RTKs in sustaining proliferative signaling was explored. Phospho-RTK arrays, which provide the phosphorylation status of a broad spectrum of RTKs were used to characterize cell lines, and tyrosine kinase inhibitors were used to asses the role of RTKs in sustaining viability. Transformed cell lines retained phosphorylation of PDGFRα in the PDGF-AA independent state. Concurrent phosphorylation of additional receptors was also observed. Five different patterns of phosphorylation were documented: PDGFRα alone and PDGFRα in combination with EGFR, IGFR, AXL-R or HGFR. These patterns of phosphorylation were retained in orthotopic xenografts and remained consistent over time as these cell lines transitioned from the pre-transformed to transformed state. Targeted treatments revealed PDGFRα inhibition in cell lines with co-phosphorylation had minimal effect on cell viability. However, when multiple RTKs are targeted overall receptor phosphorylation and viability decreased. The simultaneous activation of multiple RTKs has been observed in this model, suggesting that multiple RTKs may be involved in sustaining these murine GBMs. If these findings also apply to human GBM, resistance to single RTK inhibitors can be expected and combination therapies needed.

Fetched live from OpenAlex and de-inverted. Abstracts are not stored in this database: the inverted indexes are 8.6 GB of the frame’s 9.3 GB of text, and the host has 13 GB free.

How this classification was reachedexpand

Full frame machine prediction

Teacher imitation

Not calibrated prevalence, not ground truth. Human validation pending. The Gemma side is a direct model label for every work in the frame, read from the title-only record. The Codex side is a classifier learned from the 10,348 direct Codex labels and calibrated to design-weighted sample rates; fields without enough sample support carry no Codex call. Candidate is the union of the two sides; consensus is their intersection. These outputs are machine_predicted_unvalidated and are not human labels.

metaresearch head score (Codex)0.000
metaresearch head score (Gemma)0.000
Version: metacan-v3-hybrid-931329e0061cValidation status: machine_predicted_unvalidated
Candidate categoriesnone
Consensus categoriesnone
DomainCandidate signal: none · Consensus signal: none
Study designCandidate signal: Bench or experimental · Consensus signal: Bench or experimental
GenreCandidate signal: Empirical · Consensus signal: Empirical
Teacher disagreement score0.004
Threshold uncertainty score0.011

Distilled classifier scores by category (both heads)

CategoryCodexGemma
Metaresearch0.0000.000
Meta-epidemiology (narrow)0.0010.000
Meta-epidemiology (broad)0.0000.000
Bibliometrics0.0010.001
Science and technology studies0.0000.000
Scholarly communication0.0000.000
Open science0.0010.000
Research integrity0.0000.001
Insufficient payload (model declined to judge)0.0030.002

Machine scores (provisional)

The two teacher heads of the student model, read on this work. A score orders the frame for review; it never asserts a category, and the validation status ships verbatim with every row.

Baseline scores from an immature model (maturity gate not passed, 7 training rounds). Scores rank; they never assert a category.

Opus teacher head0.020
GPT teacher head0.259
Teacher spread0.240 · how far apart the two teachers sit on this one work
Validation statusscore_only:v0-immature-baseline · verbatim from the scoring run: score_only means the number may rank works, and no category label ships from it

Classification

machine, unvalidated

Machine predicted; a candidate call from one source (direct Gemma or distilled Codex), not a consensus.

The models applied no category: nothing in the taxonomy fit this work.
Study designBench or experimental
Domainnot available
GenreEmpirical

How this classification was reached, model by model and score by score, is at the end of the page under "How this classification was reached".

Quick stats

Citations0
Published2016
Admission routes1
Has abstractyes

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