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Record W2588133079 · doi:10.1093/neuonc/now212.641

PDTB-22. THE ROLE OF THE CHROMOSOME 19 microRNA CLUSTER (C19MC) IN EMBRYONAL TUMOR WITH MULTILAYERED ROSETTES (ETMR)

2016· article· en· W2588133079 on OpenAlexaff
Myra Joy Chen, Rajiv Dixit, Patrick Sin‐Chan, Annie Huang, Jennifer A. Chan

Bibliographic record

VenueNeuro-Oncology · 2016
Typearticle
Languageen
FieldBiochemistry, Genetics and Molecular Biology
TopicMicroRNA in disease regulation
Canadian institutionsHospital for Sick ChildrenUniversity of Calgary
Fundersnot available
KeywordsNeuroepithelial cellBiologyEmbryonic stem cellStem cellProgenitor cellNeural stem cellCell biologymicroRNACancer researchPathologyGeneticsGeneMedicine

Abstract

fetched live from OpenAlex

Embryonal tumor with multilayered rosettes (ETMR) is an aggressive primitive neuroectodermal brain tumor that affects infants and children under the age of four. Histologically, the tumor is characterized by a growth pattern that includes sheets of primitive cells punctuated by zones of neuropil and multilayered rosettes that are reminiscent of embryonic neuroepithelium. Genetically, ETMR is characterized by a focal amplification of chromosome 19q13.42, encoding the chromosome 19 microRNA cluster (C19MC). Previous studies have suggested that overexpression of the microRNAs within this cluster, including miR-517a, miR-517c and miR-520g, can increase malignancy of cell lines derived from non-ETMR primitive neuroectodermal tumours. Here, we ask whether overexpression of selected miRNAs in the cluster is sufficient to alter the cell fate of normal embryonic neural stem cells in the developing cortex. Using in utero electroporation to overexpress selected C19MC microRNAs in embryonic ventricular zone progenitors during the neurogenic period, we found that transient overexpression of miR-520g or a construct containing miR-517,-519, and -520 resulted in focal lesions containing both stem-like cells and a collection of heterochronic differentiating neurons ectopically arrested in the intermediate zone. The ectopic cells showed increasing maturation with time. Similar overexpression at postnatal ages did not yield analogous lesions. Our results suggest that the embryonic neuroepithelial cells are the substrate for transformation in ETMR, and that miRNAs in the C19MC cluster can regulate the temporal identity of immature/embyonic neural progenitors. Additional studies are required to determine the effects of stable overexpression of C19MC miRNAs, and to discern the effects on cell fate upon C19MC miRNA overexpression.

Fetched live from OpenAlex and de-inverted. Abstracts are not stored in this database: the inverted indexes are 8.6 GB of the frame’s 9.3 GB of text, and the host has 13 GB free.

How this classification was reachedexpand

Full frame distilled prediction

Teacher imitation

Not calibrated prevalence, not ground truth. Human validation pending. Learned from the 10,348 direct Codex labels and 10,348 direct Gemma labels. Candidate is the union of thresholded teacher heads; consensus is their intersection. These outputs are machine_predicted_unvalidated and are not human labels or direct frontier model labels.

metaresearch head score (Codex)0.000
metaresearch head score (Gemma)0.000
Version: codex-gemma-dda1882f352aValidation status: machine_predicted_unvalidated
Candidate categoriesnone
Consensus categoriesnone
DomainCandidate signal: none · Consensus signal: none
Study designCandidate signal: Bench or experimental · Consensus signal: Bench or experimental
GenreCandidate signal: Empirical · Consensus signal: Empirical
Teacher disagreement score0.121
Threshold uncertainty score0.379

Codex and Gemma teacher scores by category

CategoryCodexGemma
Metaresearch0.0000.000
Meta-epidemiology (narrow)0.0000.000
Meta-epidemiology (broad)0.0000.000
Bibliometrics0.0000.000
Science and technology studies0.0000.000
Scholarly communication0.0000.000
Open science0.0000.000
Research integrity0.0000.000
Insufficient payload (model declined to judge)0.0000.000

Machine scores (provisional)

The two teacher heads of the student model, read on this work. A score orders the frame for review; it never asserts a category, and the validation status ships verbatim with every row.

Baseline scores from an immature model (maturity gate not passed, 7 training rounds). Scores rank; they never assert a category.

Opus teacher head0.006
GPT teacher head0.232
Teacher spread0.226 · how far apart the two teachers sit on this one work
Validation statusscore_only:v0-immature-baseline · verbatim from the scoring run: score_only means the number may rank works, and no category label ships from it

Classification

machine, unvalidated

Machine predicted; a candidate call from one teacher head, not a consensus.

The models applied no category: nothing in the taxonomy fit this work.
Study designBench or experimental
Domainnot available
GenreEmpirical

How this classification was reached, model by model and score by score, is at the end of the page under "How this classification was reached".

Quick stats

Citations1
Published2016
Admission routes1
Has abstractyes

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