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Record W2592168235 · doi:10.1093/botlinnean/bow005

Allopolyploid origin of the leafy liverwort Plagiochila britannica (Plagiochilaceae)

2017· article· it· W2592168235 on OpenAlexaboutno aff
Elisabeth V. I. Barbulescu, Simon D. F. Patzak, Kathrin Feldberg, Alfons Schäfer‐Verwimp, David S. Rycroft, Matt A. M. Renner, Jochen Heinrichs

Bibliographic record

VenueBotanical Journal of the Linnean Society · 2017
Typearticle
Languageit
FieldAgricultural and Biological Sciences
TopicBryophyte Studies and Records
Canadian institutionsnot available
Fundersnot available
KeywordsBiologyLineage (genetic)BotanyGenusLeafyChloroplast DNATaxonEvolutionary biologyPhylogenetic treeGenetics

Abstract

fetched live from OpenAlex

Allopolyploidy is an important mode of speciation in angiosperms, ferns and mosses, but has been considered of little importance in liverworts. The few known examples include taxa of the simple thalloid genus Pellia, the complex thalloid genera Corsinia, Reboulia and Targionia and the leafy liverworts Barbilophozia, Calypogeia and Porella. The diploid Plagiochila britannica has alternatively been considered an autopolyploid derivative of Plagiochila porelloides or an allopolyploid of Plagiochila asplenioides and P. porelloides; however, experimental evidence is still lacking. Here we present phylogenetic analyses of the P. asplenioides-P. britannica-P. porelloides complex based on a sampling of 37 accessions and plastid DNA rps4 and rbcL and nuclear ribosomal ITS1-5.8S-ITS2 sequences. Plastid DNA sequences of four accessions of P. britannica cluster with P. asplenioides, whereas nrITS sequences of P. britannica cluster with P. porelloides. We thus conclude that P. britannica is an allopolyploid hybrid of P. asplenioides and P. porelloides, with P. asplenioides the probable donor of the plastome and P. porelloides of the nuclear DNA. Contrary to earlier belief, P. britannica is not closely related to Plagiochila arctica. European and North American accessions of P. porelloides form sister lineages. A putative accession of P. asplenioides from Canada forms a separate lineage and may represent another taxon.

Fetched live from OpenAlex and de-inverted. Abstracts are not stored in this database: the inverted indexes are 8.6 GB of the frame’s 9.3 GB of text, and the host has 13 GB free.

How this classification was reachedexpand

Full frame distilled prediction

Teacher imitation

Not calibrated prevalence, not ground truth. Human validation pending. Learned from the 10,348 direct Codex labels and 10,348 direct Gemma labels. Candidate is the union of thresholded teacher heads; consensus is their intersection. These outputs are machine_predicted_unvalidated and are not human labels or direct frontier model labels.

metaresearch head score (Codex)0.001
metaresearch head score (Gemma)0.001
Version: codex-gemma-dda1882f352aValidation status: machine_predicted_unvalidated
Candidate categoriesScience and technology studies
Consensus categoriesnone
DomainCandidate signal: none · Consensus signal: none
Study designCandidate signal: Not applicable · Consensus signal: none
GenreCandidate signal: Empirical · Consensus signal: Empirical
Teacher disagreement score0.557
Threshold uncertainty score0.998

Codex and Gemma teacher scores by category

CategoryCodexGemma
Metaresearch0.0010.001
Meta-epidemiology (narrow)0.0000.000
Meta-epidemiology (broad)0.0010.004
Bibliometrics0.0000.000
Science and technology studies0.0030.002
Scholarly communication0.0000.000
Open science0.0040.002
Research integrity0.0000.002
Insufficient payload (model declined to judge)0.0000.000

Machine scores (provisional)

The two teacher heads of the student model, read on this work. A score orders the frame for review; it never asserts a category, and the validation status ships verbatim with every row.

Baseline scores from an immature model (maturity gate not passed, 7 training rounds). Scores rank; they never assert a category.

Opus teacher head0.025
GPT teacher head0.250
Teacher spread0.224 · how far apart the two teachers sit on this one work
Validation statusscore_only:v0-immature-baseline · verbatim from the scoring run: score_only means the number may rank works, and no category label ships from it

Classification

machine, unvalidated

Machine predicted; a candidate call from one teacher head, not a consensus.

Study designNot applicable
Domainnot available
GenreEmpirical

How this classification was reached, model by model and score by score, is at the end of the page under "How this classification was reached".

Quick stats

Citations11
Published2017
Admission routes1
Has abstractyes

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Same venueBotanical Journal of the Linnean SocietySame topicBryophyte Studies and RecordsFrench-language works237,207