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Record W2596303303 · doi:10.1161/atvb.32.suppl_1.a18

Abstract 18: Apo(a) Isoform Size Is Associated with Myocardial Infarction in a Study of an Admixed Population from the Central Valley of Costa Rica

2012· article· en· W2596303303 on OpenAlexaff
Lance A. Bare, Charles M. Rowland, Marlys L. Koschinsky, Michael B. Boffa, Carmen H. Tong, André R. Arellano, Joseph J. Catanese, Dov Shiffman, James J. Devlin, Hannia Campos

Bibliographic record

VenueArteriosclerosis Thrombosis and Vascular Biology · 2012
Typearticle
Languageen
FieldMedicine
TopicLipoproteins and Cardiovascular Health
Canadian institutionsUniversity of Windsor
Fundersnot available
KeywordsGene isoformApolipoprotein BLipoprotein(a)PopulationWestern blotLipoproteinSingle-nucleotide polymorphismAlleleBiologyInternal medicineGeneticsGenotypeMolecular biologyGeneDemographyMedicineEndocrinologyCholesterol

Abstract

fetched live from OpenAlex

Objective: Lipoprotein(a) [Lp(a)] particles contain a single apolipoprotein(a) [apo(a)] molecule. Both plasma Lp(a) levels and apo(a) isoform size are associated with myocardial infarction (MI). We asked whether Lp(a) level and apo(a) isoform size are independently associated with MI in an admixed population (African, Amer-indian, Southern European) from the Central Valley of Costa Rica. Methods: Apo(a) isoform size is determined by the number of kringle IV type 2 (KIV-2) repeats in the protein, and when two different alleles are expressed, the smaller isoform is typically expressed at higher levels. We assessed isoform size by Western blot and Lp(a) levels by immunoturbidometric assay in randomly selected MI cases and population-based controls from a study of 4186 Central Valley Costa Ricans. Association with MI was assessed using logistic regression models that included Lp(a) level and the size of the smaller isoform as explanatory variables. A model including adjustment for local ethnicity determined by principal component analysis of 41 SNPs within 410 kilobases of the gene encoding apo(a) [LPA] was performed on a subset of subjects with genotypes for all 41 SNPs. Results: For 433 subjects, for whom one or both apo(a) isoform sizes were determined by Western blot, we found that both size of the smaller expressed apo(a) isoform and Lp(a) level were associated with MI: OR=1.48 (p= 0.021) per decrease of 5 KIV-2 repeats and OR=1.27 (p=2.8x10-5) per 10 mg/dL increase in Lp(a). In multivariable analysis, the size of the smaller apo(a) isoform was associated with MI after adjustment for Lp(a) levels (OR=1.29; p= 0.034). Similarly, Lp(a) levels remained associated with MI after adjustment for the size of the smaller apo(a) isoform (OR=1.19; p=0.005). Further adjustment for local ethnicity did not appreciably change the association of the smaller apo(a) isoform with MI (OR= 1.38;p= 0.056) or the association of Lp(a) levels with MI (OR=1.11, p=0.18). Apo(a) isoform size was strongly associated with Lp(a) levels (9.6 mg/dL increase in Lp(a) per decrease of 5 KIV-2 repeats (p=1.7x10-24). Conclusion: Apo(a) isoform size is associated with MI after adjustment for Lp(a) in a population from the Central Valley of Costa Rica. The hypothesis that apo(a) isoform size is associated with MI independent of Lp(a) levels appears worthy of further study.

Fetched live from OpenAlex and de-inverted. Abstracts are not stored in this database: the inverted indexes are 8.6 GB of the frame’s 9.3 GB of text, and the host has 13 GB free.

How this classification was reachedexpand

Full frame machine prediction

Teacher imitation

Not calibrated prevalence, not ground truth. Human validation pending. The Gemma side is a direct model label for every work in the frame, read from the title-only record. The Codex side is a classifier learned from the 10,348 direct Codex labels and calibrated to design-weighted sample rates; fields without enough sample support carry no Codex call. Candidate is the union of the two sides; consensus is their intersection. These outputs are machine_predicted_unvalidated and are not human labels.

metaresearch head score (Codex)0.000
metaresearch head score (Gemma)0.001
Version: metacan-v3-hybrid-931329e0061cValidation status: machine_predicted_unvalidated
Candidate categoriesnone
Consensus categoriesnone
DomainCandidate signal: none · Consensus signal: none
Study designCandidate signal: Observational · Consensus signal: Observational
GenreCandidate signal: Empirical · Consensus signal: Empirical
Teacher disagreement score0.018
Threshold uncertainty score0.035

Distilled classifier scores by category (both heads)

CategoryCodexGemma
Metaresearch0.0000.001
Meta-epidemiology (narrow)0.0000.000
Meta-epidemiology (broad)0.0000.000
Bibliometrics0.0000.001
Science and technology studies0.0010.000
Scholarly communication0.0000.000
Open science0.0000.000
Research integrity0.0000.000
Insufficient payload (model declined to judge)0.0010.000

Machine scores (provisional)

The two teacher heads of the student model, read on this work. A score orders the frame for review; it never asserts a category, and the validation status ships verbatim with every row.

Baseline scores from an immature model (maturity gate not passed, 7 training rounds). Scores rank; they never assert a category.

Opus teacher head0.037
GPT teacher head0.290
Teacher spread0.253 · how far apart the two teachers sit on this one work
Validation statusscore_only:v0-immature-baseline · verbatim from the scoring run: score_only means the number may rank works, and no category label ships from it

Classification

machine, unvalidated

Machine predicted; a candidate call from one source (direct Gemma or distilled Codex), not a consensus.

The models applied no category: nothing in the taxonomy fit this work.
Study designObservational
Domainnot available
GenreEmpirical

How this classification was reached, model by model and score by score, is at the end of the page under "How this classification was reached".

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Citations0
Published2012
Admission routes1
Has abstractyes

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