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Record W2611612790 · doi:10.1096/fj.201601378r

Epithelial Src homology region 2 domain–containing phosphatase‐1 restrains intestinal growth, secretory cell differentiation, and tumorigenesis

2017· article· en· W2611612790 on OpenAlexafffund
Caroline Leblanc, Marie‐Josée Langlois, Geneviève Coulombe, Vanessa Vaillancourt‐Lavigueur, Christine M. Jones, Julie Carrier, François Boudreau, Nathalie Rivard

Bibliographic record

VenueThe FASEB Journal · 2017
Typearticle
Languageen
FieldBiochemistry, Genetics and Molecular Biology
TopicProtein Tyrosine Phosphatases
Canadian institutionsUniversité de Sherbrooke
FundersNatural Sciences and Engineering Research Council of CanadaCanadian Institutes of Health Research
KeywordsProto-oncogene tyrosine-protein kinase SrcCarcinogenesisCell biologyHomology (biology)BiologyChemistrySignal transductionGeneticsGene

Abstract

fetched live from OpenAlex

ABSTRACT Shp‐1 (Src homology region 2 domain‐containing protein tyrosine phosphatase‐1) is a phosphatase that is highly expressed in hematopoietic and epithelial cells. Whereas its function is largely characterized in hematopoietic cells, its role in epithelial cells, such as intestinal epithelial cells (IECs), is not well known. Here, we generated mice with an IEC‐specific knockout of Shp‐1 (Src homology region 2 domain–containing phosphatase‐1; Shp‐1 IEC‐KO ). We showed that the loss of epithelial Shp‐1 leads to an intestinalomegaly that is associated with an increase in epithelial cell proliferation and size. Histologic analysis demonstrates significant perturbation of the crypt‐villus architecture with an apparent increase in the number of goblet and Paneth cells and increased expression of their respective markers {Muc2 (mucin 2), aDef, and Sox9 [SRY (sex determining region Y)‐box 9]}. Expansion of intermediate cells—common progenitors of goblet and Paneth cell lineages—is also observed in Shp‐1 IEC‐KO mice. Although sustained activation of Wnt/β‐catenin and PI3K/Akt/mammalian target of rapamycin signaling is observed, Shp‐1 IEC‐KO mice fail to develop any intestinal tumors after 15 mo; however, the loss of Shp‐1 in IECs markedly enhances tumor load Apc Min/+ mice. These findings show a novel role for Shp‐1 in the regulation of IEC growth and secretory lineage allocation, possibly via modulation of PI3K/Akt‐dependent signaling pathways. Finally, Shp‐1 does not function as a classic tumor suppressor gene in the intestinal epithelium.—Leblanc, C., Langlois, M.‐J., Coulombe, G., Vaillancourt‐Lavigueur, V., Jones, C., Carrier, J. C., Boudreau, F., Rivard, N. Epithelial Src homology region 2 domain–containing phosphatase‐1 restrains intestinal growth, secretory cell differentiation, and tumorigenesis. FASEB J . 31, 3512–3526 (2017). www.fasebj.org

Fetched live from OpenAlex and de-inverted. Abstracts are not stored in this database: the inverted indexes are 8.6 GB of the frame’s 9.3 GB of text, and the host has 13 GB free.

How this classification was reachedexpand

Full frame machine prediction

Teacher imitation

Not calibrated prevalence, not ground truth. Human validation pending. The Gemma side is a direct model label for every work in the frame, read from the title-only record. The Codex side is a classifier learned from the 10,348 direct Codex labels and calibrated to design-weighted sample rates; fields without enough sample support carry no Codex call. Candidate is the union of the two sides; consensus is their intersection. These outputs are machine_predicted_unvalidated and are not human labels.

metaresearch head score (Codex)0.000
metaresearch head score (Gemma)0.000
Version: metacan-v3-hybrid-931329e0061cValidation status: machine_predicted_unvalidated
Candidate categoriesnone
Consensus categoriesnone
DomainCandidate signal: none · Consensus signal: none
Study designCandidate signal: Bench or experimental · Consensus signal: Bench or experimental
GenreCandidate signal: Empirical · Consensus signal: Empirical
Teacher disagreement score0.001
Threshold uncertainty score0.003

Distilled classifier scores by category (both heads)

CategoryCodexGemma
Metaresearch0.0000.000
Meta-epidemiology (narrow)0.0000.000
Meta-epidemiology (broad)0.0000.000
Bibliometrics0.0000.000
Science and technology studies0.0000.000
Scholarly communication0.0000.000
Open science0.0000.000
Research integrity0.0000.001
Insufficient payload (model declined to judge)0.0010.000

Machine scores (provisional)

The two teacher heads of the student model, read on this work. A score orders the frame for review; it never asserts a category, and the validation status ships verbatim with every row.

Baseline scores from an immature model (maturity gate not passed, 7 training rounds). Scores rank; they never assert a category.

Opus teacher head0.013
GPT teacher head0.234
Teacher spread0.221 · how far apart the two teachers sit on this one work
Validation statusscore_only:v0-immature-baseline · verbatim from the scoring run: score_only means the number may rank works, and no category label ships from it

Classification

machine, unvalidated

Machine predicted; a candidate call from one source (direct Gemma or distilled Codex), not a consensus.

The models applied no category: nothing in the taxonomy fit this work.
Study designBench or experimental
Domainnot available
GenreEmpirical

How this classification was reached, model by model and score by score, is at the end of the page under "How this classification was reached".

Quick stats

Citations8
Published2017
Admission routes2
Has abstractyes

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