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Record W2613494298 · doi:10.1139/cjb-2016-0235

Characterization of the root and soil mycobiome associated with invasive <i>Microstegium vimineum</i> in the presence and absence of a native plant community

2017· article· en· W2613494298 on OpenAlexvenueno aff
Brittany A. North, Albert P. Torzilli

Bibliographic record

VenueBotany · 2017
Typearticle
Languageen
FieldAgricultural and Biological Sciences
TopicMycorrhizal Fungi and Plant Interactions
Canadian institutionsnot available
Fundersnot available
KeywordsBiologyMonocultureNative plantBotanyRibosomal Intergenic Spacer analysisInvasive speciesPlant use of endophytic fungi in defenseIntroduced speciesEcologyInternal transcribed spacerRibosomal RNA

Abstract

fetched live from OpenAlex

The potential role of fungal root endophytes (including mycorrhizae) in the invasiveness of Microstegium vimineum (Trin.) A. Camus, was researched using automated ribosomal intergenic spacer analysis (ARISA) and brightfield microscopy. Fungal communities of roots from two native plants (Onoclea sensibilis L. and Amphicarpaea bracteata (L.) Fernald) were compared with those found in Microstegium. Fungal communities from the bulk soils also were examined in terms of their potential influence on the root mycobiomes. All three plants occurred in natural communities as monocultures and together in one mixed community in Northern Virginia where Microstegium has recently invaded. Principal coordinate analysis of ARISA data identified fungal communities unique to roots from each monoculture. When the three plants co-occurred in a mixed setting, Microstegium was found to maintain its distinct fungal community while the fungal communities of the two native plants overlapped. In contrast, soil fungal communities showed no specific plant associations. Brightfield microscopy confirmed the presence of endophytic fungi in all three plants. The results recorded here suggest a positive contribution by the root mycobiome in promoting the invasive ability of Microstegium, providing a basis for future experiments testing this hypothesis.

Fetched live from OpenAlex and de-inverted. Abstracts are not stored in this database: the inverted indexes are 8.6 GB of the frame’s 9.3 GB of text, and the host has 13 GB free.

How this classification was reachedexpand

Full frame machine prediction

Teacher imitation

Not calibrated prevalence, not ground truth. Human validation pending. The Gemma side is a direct model label for every work in the frame, read from the title-only record. The Codex side is a classifier learned from the 10,348 direct Codex labels and calibrated to design-weighted sample rates; fields without enough sample support carry no Codex call. Candidate is the union of the two sides; consensus is their intersection. These outputs are machine_predicted_unvalidated and are not human labels.

metaresearch head score (Codex)0.000
metaresearch head score (Gemma)0.000
Version: metacan-v3-hybrid-931329e0061cValidation status: machine_predicted_unvalidated
Candidate categoriesnone
Consensus categoriesnone
DomainCandidate signal: none · Consensus signal: none
Study designCandidate signal: Observational · Consensus signal: none
GenreCandidate signal: Empirical · Consensus signal: Empirical
Teacher disagreement score0.004
Threshold uncertainty score0.008

Distilled classifier scores by category (both heads)

CategoryCodexGemma
Metaresearch0.0000.000
Meta-epidemiology (narrow)0.0000.000
Meta-epidemiology (broad)0.0000.000
Bibliometrics0.0000.000
Science and technology studies0.0000.000
Scholarly communication0.0000.000
Open science0.0000.000
Research integrity0.0000.000
Insufficient payload (model declined to judge)0.0000.000

Machine scores (provisional)

The two teacher heads of the student model, read on this work. A score orders the frame for review; it never asserts a category, and the validation status ships verbatim with every row.

Baseline scores from an immature model (maturity gate not passed, 7 training rounds). Scores rank; they never assert a category.

Opus teacher head0.018
GPT teacher head0.208
Teacher spread0.190 · how far apart the two teachers sit on this one work
Validation statusscore_only:v0-immature-baseline · verbatim from the scoring run: score_only means the number may rank works, and no category label ships from it

Classification

machine, unvalidated

Machine predicted; a candidate call from one source (direct Gemma or distilled Codex), not a consensus.

The models applied no category: nothing in the taxonomy fit this work.
Study designObservational
Domainnot available
GenreEmpirical

How this classification was reached, model by model and score by score, is at the end of the page under "How this classification was reached".

Quick stats

Citations5
Published2017
Admission routes1
Has abstractyes

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