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Record W2618268848 · doi:10.1038/nature22401

Establishment and cryptic transmission of Zika virus in Brazil and the Americas

2017· article· en· W2618268848 on OpenAlexaff
Nuno R. Faria, Josh Quick, Ingra Morales Claro, Julien Thézé, Jhennifer Guimarães Lourenço de Jesus, Marta Giovanetti, Moritz U. G. Kraemer, Sarah C. Hill, Allison Black, Antônio Charlys da Costa, L.C. Junqueira Franco, Serena Pocas Moreno Silva, Chieh‐Hsi Wu, Jayna Raghwani, Simon Cauchemez, Louis du Plessis, Mariana Pastorello Verotti, W. K. de Oliveira, Eduardo Hage Carmo, Giovanini Evelim Coelho, A. C. F. S. Santelli, Livia Vinhal, Cláudio Maierovitch Pessanha Henriques, Jared T. Simpson, Matthew Loose, Kristian G. Andersen, Nathan D. Grubaugh, Sneha Somasekar, Charles Y. Chiu, José Esteban Muñoz‐Medina, César González-Bonilla, Carlos F. Arias, Lia Laura Lewis‐Ximenez, Sally A. Baylis, Alexandre Chieppe, Shirlei Ferreira de Aguiar, Carlos Augusto Fernandes, P. S. Lemos, Bruna Laís Sena do Nascimento, H. A. O Monteiro, Isadora Cristina de Siqueira, Maria Gabriela de Queiroz, Themis Rocha de Souza, João Felipe Bezerra, Marisa Lemos, G. F. Pereira, D. Loudal, Lúcia Cristina Corrêa Moura, Rafael Dhália, R. F. França, Tereza Magalhães, Ernesto T. A. Marques, Thomas Jaenisch, Gabriel Luz Wallau, Magliones Carneiro de Lima, Valdinete Alves do Nascimento, Erenilde Marques de Cerqueira, Maricélia Maia de Lima, D. L. Mascarenhas, José Pereira de Moura Neto, Anna S. Levin, Tânia Regina Tozetto‐Mendoza, Sílvia Nunes Szente Fonseca, Maria Cássia Mendes-Corrêa, Flavio Augusto de Pádua Milagres, Aluísio Augusto Cotrim Segurado, Edward C. Holmes, Andrew Rambaut, Trevor Bedford, Márcio Roberto Teixeira Nunes, Éster Cerdeira Sabino, Nicholas J. Loman, Oliver G. Pybus

Bibliographic record

VenueNature · 2017
Typearticle
Languageen
FieldMedicine
TopicMosquito-borne diseases and control
Canadian institutionsOntario Institute for Cancer Research
FundersNational Institute of General Medical SciencesNational Heart, Lung, and Blood InstituteNational Institute of Allergy and Infectious DiseasesMedical Research CouncilUniversidade de São PauloConselho Nacional de Desenvolvimento Científico e TecnológicoWellcome TrustAgence Nationale de la RechercheFundação de Amparo à Ciência e Tecnologia do Estado de PernambucoAbbott LaboratoriesFundação de Amparo à Pesquisa do Estado de São PauloOxford Nanopore TechnologiesNational Institutes of HealthFundação Oswaldo CruzUnited States Agency for International DevelopmentNational Health and Medical Research CouncilCancer Research UKNational Science Foundation
KeywordsZika virusOutbreakGeographyLatin AmericansTransmission (telecommunications)BiologyGenomeVirologyEvolutionary biologyVirusGeneticsPolitical science

Abstract

fetched live from OpenAlex
No abstract in any covered source. Its absence is recorded, not treated as a negative.

No abstract. This is not a gap in this database; OpenAlex has none either. 23.3% of the frame is in this state, and the screen finds HALF as much metaresearch here, so the absence is a measured bias rather than a missing field.

How this classification was reachedexpand

Full frame machine prediction

Teacher imitation

Not calibrated prevalence, not ground truth. Human validation pending. The Gemma side is a direct model label for every work in the frame, read from the title-only record. The Codex side is a classifier learned from the 10,348 direct Codex labels and calibrated to design-weighted sample rates; fields without enough sample support carry no Codex call. Candidate is the union of the two sides; consensus is their intersection. These outputs are machine_predicted_unvalidated and are not human labels.

metaresearch head score (Codex)0.000
metaresearch head score (Gemma)0.002
Version: metacan-v3-hybrid-931329e0061cValidation status: machine_predicted_unvalidated
Candidate categoriesnone
Consensus categoriesnone
DomainCandidate signal: none · Consensus signal: none
Study designCandidate signal: Observational · Consensus signal: Observational
GenreCandidate signal: Empirical · Consensus signal: Empirical
Teacher disagreement score0.124
Threshold uncertainty score0.247

Distilled classifier scores by category (both heads)

CategoryCodexGemma
Metaresearch0.0000.002
Meta-epidemiology (narrow)0.0000.000
Meta-epidemiology (broad)0.0000.000
Bibliometrics0.0010.001
Science and technology studies0.0010.001
Scholarly communication0.0010.001
Open science0.0000.001
Research integrity0.0000.000
Insufficient payload (model declined to judge)0.0010.000

Machine scores (provisional)

The two teacher heads of the student model, read on this work. A score orders the frame for review; it never asserts a category, and the validation status ships verbatim with every row.

Baseline scores from an immature model (maturity gate not passed, 7 training rounds). Scores rank; they never assert a category.

Opus teacher head0.005
GPT teacher head0.295
Teacher spread0.290 · how far apart the two teachers sit on this one work
Validation statusscore_only:v0-immature-baseline · verbatim from the scoring run: score_only means the number may rank works, and no category label ships from it

Classification

machine, unvalidated

Machine predicted; a candidate call from one source (direct Gemma or distilled Codex), not a consensus.

The models applied no category: nothing in the taxonomy fit this work.
Study designObservational
Domainnot available
GenreEmpirical

How this classification was reached, model by model and score by score, is at the end of the page under "How this classification was reached".

Quick stats

Citations668
Published2017
Admission routes1
Has abstractno

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