MétaCan
Menu
Back to cohort
Record W262058704

Isolation of tagged INUIT gene by establishment of TAIL-PCR in Tobacco

2007· article· en· W262058704 on OpenAlexaboutno aff
Sharvani Munender Vodnala

Bibliographic record

VenueKTH Publication Database DiVA (KTH Royal Institute of Technology) · 2007
Typearticle
Languageen
FieldBiochemistry, Genetics and Molecular Biology
TopicPlant tissue culture and regeneration
Canadian institutionsnot available
Fundersnot available
KeywordsSubtropicsBiologyGeneCropIsolation (microbiology)Key (lock)GeneticsEcologyBioinformatics
DOInot available

Abstract

fetched live from OpenAlex

Chilling injury is one of the key factors restraining plant growth in tropical and subtropical crop species. It is recognized that stability of microtubules is directly linked to systemic cold resistance of entire organism. We used a mutant approach in order to examine a possible function of microtubules in cold resistance. For this reason we characterized a mutant called inuit generated by T-DNA activation tagging (Koncz et al. 1994; Ahad et al. 2003). Inuit mutants were directly screened for long term cold resistance. The analysis of these mutants is targeted to isolate new components of so far hardly known pathway that links cold sensing to microtubular response. A mutant called ATER was screened for resistance to anti microtubular herbicide EPC are altered in microtubular dynamics and are cross resistant to chilling stress (Ahad et al. 2002; 2003). From one of these mutant lines a novel member of cytochrome-P450 oxidase superfamily was identified by a tag. This gene might represent a central element of environmental signaling towards cytoskeleton. Although plasmid rescue technique works very well in Arabidopsis, it seems in tobacco does not work in same extent. Therefore we established a technique called TAIL-PCR in tobacco which is an efficient method to amplify unknown sequences adjacent to known insertion sites was applied here in this study to isolate INUIT gene.

Fetched live from OpenAlex and de-inverted. Abstracts are not stored in this database: the inverted indexes are 8.6 GB of the frame’s 9.3 GB of text, and the host has 13 GB free.

How this classification was reachedexpand

Full frame machine prediction

Teacher imitation

Not calibrated prevalence, not ground truth. Human validation pending. The Gemma side is a direct model label for every work in the frame, read from the title-only record. The Codex side is a classifier learned from the 10,348 direct Codex labels and calibrated to design-weighted sample rates; fields without enough sample support carry no Codex call. Candidate is the union of the two sides; consensus is their intersection. These outputs are machine_predicted_unvalidated and are not human labels.

metaresearch head score (Codex)0.001
metaresearch head score (Gemma)0.000
Version: metacan-v3-hybrid-931329e0061cValidation status: machine_predicted_unvalidated
Candidate categoriesnone
Consensus categoriesnone
DomainCandidate signal: none · Consensus signal: none
Study designCandidate signal: Bench or experimental · Consensus signal: Bench or experimental
GenreCandidate signal: Empirical · Consensus signal: Empirical
Teacher disagreement score0.002
Threshold uncertainty score0.008

Distilled classifier scores by category (both heads)

CategoryCodexGemma
Metaresearch0.0010.000
Meta-epidemiology (narrow)0.0010.001
Meta-epidemiology (broad)0.0010.001
Bibliometrics0.0010.001
Science and technology studies0.0000.000
Scholarly communication0.0010.000
Open science0.0010.001
Research integrity0.0010.001
Insufficient payload (model declined to judge)0.0020.004

Machine scores (provisional)

The two teacher heads of the student model, read on this work. A score orders the frame for review; it never asserts a category, and the validation status ships verbatim with every row.

Baseline scores from an immature model (maturity gate not passed, 7 training rounds). Scores rank; they never assert a category.

Opus teacher head0.011
GPT teacher head0.248
Teacher spread0.237 · how far apart the two teachers sit on this one work
Validation statusscore_only:v0-immature-baseline · verbatim from the scoring run: score_only means the number may rank works, and no category label ships from it

Classification

machine, unvalidated

Machine predicted; a candidate call from one source (direct Gemma or distilled Codex), not a consensus.

The models applied no category: nothing in the taxonomy fit this work.
Study designBench or experimental
Domainnot available
GenreEmpirical

How this classification was reached, model by model and score by score, is at the end of the page under "How this classification was reached".

Quick stats

Citations0
Published2007
Admission routes1
Has abstractyes

Explore more

Same venueKTH Publication Database DiVA (KTH Royal Institute of Technology)Same topicPlant tissue culture and regenerationFrench-language works237,207