MOLECULAR AND FUNCTIONAL CHARACTERIZATION OF THE lpdA1 GENE IN S. meliloti
Bibliographic record
Abstract
The alfalfa-Sinorhizobium symbiosis is one of the best studied for plant-microbe associations. The pyruvate dehydrogenase complex catalyzes the key metabolic step connecting the glycolysis to the Tricarboxylic acid (TCA) cycle. The PDH also participates in anaplerotic synthesis of acetyl-CoA in bacteroids, or when grown in the presence of dicarboxylic acids as the sole carbon sources. The complex consists of multiple copies of the three subunits, pyruvate dehydrogenase (EC 1.2.4.1), that acts as the E1 component of the complex, dihydrolipoamide transacetylase (EC 2.3.1.12), the E2 component, and dihydrolipoamide dehydrogenase (EC 1.8.1.4), that participates as the E3 subunit. The lpdA1 gene was mutated through the site-directed, single crossover recombination, using modified pVIK112 suicide plasmids. The lpdA1 mutant failed to grow on pyruvate, and was significantly delayed on other tested carbon sources. The activity of the pyruvate dehydrogenase complex was not detected in this mutant, and the regulation of the lpdA1 was not dependent on the presence of pyruvate. This mutant was Nod+, but appeared Fix-.
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How this classification was reachedexpand
Full frame machine prediction
Teacher imitationNot calibrated prevalence, not ground truth. Human validation pending. The Gemma side is a direct model label for every work in the frame, read from the title-only record. The Codex side is a classifier learned from the 10,348 direct Codex labels and calibrated to design-weighted sample rates; fields without enough sample support carry no Codex call. Candidate is the union of the two sides; consensus is their intersection. These outputs are machine_predicted_unvalidated and are not human labels.
Distilled classifier scores by category (both heads)
| Category | Codex | Gemma |
|---|---|---|
| Metaresearch | 0.000 | 0.000 |
| Meta-epidemiology (narrow) | 0.000 | 0.000 |
| Meta-epidemiology (broad) | 0.000 | 0.000 |
| Bibliometrics | 0.000 | 0.000 |
| Science and technology studies | 0.000 | 0.000 |
| Scholarly communication | 0.000 | 0.000 |
| Open science | 0.000 | 0.000 |
| Research integrity | 0.000 | 0.001 |
| Insufficient payload (model declined to judge) | 0.001 | 0.001 |
Machine scores (provisional)
The two teacher heads of the student model, read on this work. A score orders the frame for review; it never asserts a category, and the validation status ships verbatim with every row.
Baseline scores from an immature model (maturity gate not passed, 7 training rounds). Scores rank; they never assert a category.
score_only:v0-immature-baseline · verbatim from the scoring run: score_only means the number may rank works, and no category label ships from itClassification
machine, unvalidatedMachine predicted; a candidate call from one source (direct Gemma or distilled Codex), not a consensus.
How this classification was reached, model by model and score by score, is at the end of the page under "How this classification was reached".