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Record W2622721107 · doi:10.5539/jas.v9n7p22

14-3-3 Lambda Protein Affects Anthocyanin Production in Arabidopsis thaliana during Drought Stress

2017· article· en· W2622721107 on OpenAlexvenueno aff
Fizal Nabbie, Jordan N. Smith, Serhiy Hnatyshyn, Bethanne M. Warrack, Huidong Gu, Daniel Merenich, Kenneth Myers, Bela Peethambaran

Bibliographic record

VenueJournal of Agricultural Science · 2017
Typearticle
Languageen
FieldBiochemistry, Genetics and Molecular Biology
Topic14-3-3 protein interactions
Canadian institutionsnot available
Fundersnot available
KeywordsPhenylpropanoidMetabolomicsAnthocyaninArabidopsis thalianaMetabolitePetunidinMutantBiologyArabidopsisWild typeBiochemistryChemistryBotanyGeneBiosynthesisMalvidinCyanidinBioinformatics

Abstract

fetched live from OpenAlex

Plants evolve to adapt to environmental stresses, including changes at the genetic and molecular levels. For bioengineers to utilize genetic manipulation to build tolerance into crops, a better understanding of the mechanism is needed. Published studies have demonstrated that 14-3-3 Lambda (14-3-3 Lambda) protein affect the phenylpropanoid (Pp) biosynthetic pathway and alters production of flavonoids and downstream compounds of importance for stress tolerance. The 14-3-3 family of proteins binds to many different client proteins and serves as signaling scaffolds. In this study 14-3-3 Lambda knockout mutants were used to investigate changes in metabolite accumulation in the downstream Pp pathway. Amongst them are anthocyanins which are important antioxidants involved in a variety of plant functions including stress response. Investigating how drought stress influenced anthocyanin production identified nodes in the Pp pathway affected by 14-3-3 Lambda. A metabolomics analysis employing high resolution mass spectrometry (HRMS) and metabolomics software was used to identify metabolites in 14-3-3 knockout which changed relative to wild-type A. thaliana (Columbia-0) during drought stress. The metabolites Cy-3-p-coumaurolysinapoylsophoroside-5-diglucoside, 3-caffeoylferuloylsophoroside- 5-succinoylglucoside, 3-caffeoylferuloylsophoroside-5-malonyldiglucoside, 3-feruloylsophoroside-5-succinoyl glucoside, petunidin-3,5-O-diglucoside and malvidin-3-O-p-coumarylmonoglucoside show significant differences in their profiles ranging from 18- to > 500-fold between the Col-0 and 14-3-3 Lambda knockout in wet and dry groups. The findings suggest that 14-3-3 Lambda interacts along the CHS, and CHI nodes, which in turn regulate the downstream production of specific anthocyanins. The interaction of 14-3-3 Lambda with CHS was confirmed using co-immunoprecipitation and co-localization studies. This study supports the hypothesis that manipulation of gene expression of 14-3-3 Lambda can lead to development of drought tolerance in plants.

Fetched live from OpenAlex and de-inverted. Abstracts are not stored in this database: the inverted indexes are 8.6 GB of the frame’s 9.3 GB of text, and the host has 13 GB free.

How this classification was reachedexpand

Full frame distilled prediction

Teacher imitation

Not calibrated prevalence, not ground truth. Human validation pending. Learned from the 10,348 direct Codex labels and 10,348 direct Gemma labels. Candidate is the union of thresholded teacher heads; consensus is their intersection. These outputs are machine_predicted_unvalidated and are not human labels or direct frontier model labels.

metaresearch head score (Codex)0.000
metaresearch head score (Gemma)0.001
Version: codex-gemma-dda1882f352aValidation status: machine_predicted_unvalidated
Candidate categoriesnone
Consensus categoriesnone
DomainCandidate signal: none · Consensus signal: none
Study designCandidate signal: Bench or experimental · Consensus signal: Bench or experimental
GenreCandidate signal: Empirical · Consensus signal: Empirical
Teacher disagreement score0.396
Threshold uncertainty score0.343

Codex and Gemma teacher scores by category

CategoryCodexGemma
Metaresearch0.0000.001
Meta-epidemiology (narrow)0.0000.000
Meta-epidemiology (broad)0.0000.000
Bibliometrics0.0000.000
Science and technology studies0.0000.000
Scholarly communication0.0000.000
Open science0.0010.000
Research integrity0.0000.000
Insufficient payload (model declined to judge)0.0000.000

Machine scores (provisional)

The two teacher heads of the student model, read on this work. A score orders the frame for review; it never asserts a category, and the validation status ships verbatim with every row.

Baseline scores from an immature model (maturity gate not passed, 7 training rounds). Scores rank; they never assert a category.

Opus teacher head0.009
GPT teacher head0.263
Teacher spread0.253 · how far apart the two teachers sit on this one work
Validation statusscore_only:v0-immature-baseline · verbatim from the scoring run: score_only means the number may rank works, and no category label ships from it

Classification

machine, unvalidated

Machine predicted; a candidate call from one teacher head, not a consensus.

The models applied no category: nothing in the taxonomy fit this work.
Study designBench or experimental
Domainnot available
GenreEmpirical

How this classification was reached, model by model and score by score, is at the end of the page under "How this classification was reached".

Quick stats

Citations6
Published2017
Admission routes1
Has abstractyes

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