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Record W2624335570 · doi:10.1111/jfb.13345

Biosynthesis of 1α‐hydroxycorticosterone in the winter skate <i>Leucoraja ocellata</i>: evidence to suggest a novel steroidogenic route

2017· article· en· W2624335570 on OpenAlex
Julia Wiens, Ryan Calvin Ho, Ann Karen C. Brassinga, Courtney A. Deck, Patrick J. Walsh, Robert N. Ben, Kyle McClymont, Thomas A. Charlton, Andrew N. Evans, W. Gary Anderson

Why this work is in the frame

A frame that forgets how it found something cannot be audited. These are the routes that admitted this work.

affAt least one author lists a Canadian institution in the pinned OpenAlex snapshot.
fundA Canadian funder is recorded on the work.

Bibliographic record

VenueJournal of Fish Biology · 2017
Typearticle
Languageen
FieldBiochemistry, Genetics and Molecular Biology
TopicSteroid Chemistry and Biochemistry
Canadian institutionsUniversity of OttawaUniversity of Manitoba
FundersCanada Research Chairs
KeywordsBiologyRhodococcusHydroxylationBacteriaSteroidSkateActinobacteriaBiochemistryMetabolismMicrobiologyEnzymeGenetics16S ribosomal RNA

Abstract

fetched live from OpenAlex

The present study explores the ability of intracellular bacteria within the renal‐inter‐renal tissue of the winter skate Leucoraja ocellata to metabolize steroids and contribute to the synthesis of the novel elasmobranch corticosteroid, 1α‐hydroxycorticosterone (1α‐ OH ‐B). Despite the rarity of C1 hydroxylation noted in the original identification of 1α‐ OH ‐B, literature provides evidence for steroid C1 hydroxylation by micro‐organisms. Eight ureolytic bacterial isolates were identified in the renal‐inter‐renal tissue of L. ocellata , the latter being the site of 1α‐ OH ‐B synthesis. From incubations of bacterial isolates with known amounts of potential 1α‐ OH ‐B precursors, one isolate UM008 of the genus Rhodococcus was seen to metabolize corticosteroids and produce novel products via HPLC analysis. Cations Zn 2+ and Fe 3+ altered metabolism of certain steroid precursors, suggesting inhibition of Rhodococcus steroid catabolism. Genome sequencing of UM008 identified strong sequence and structural homology to that of Rhodococcus erythropolis PR4 . A complete enzymatic pathway for steroid‐ring oxidation as documented within other Actinobacteria was identified within the UM008 genome. This study highlights the potential role of Rhodococcus bacteria in steroid metabolism and proposes a novel alternative pathway for 1α‐ OH ‐B synthesis, suggesting a unique form of mutualism between intracellular bacteria and their elasmobranch host.

Fetched live from OpenAlex and de-inverted. Abstracts are not stored in this database: the inverted indexes are 8.6 GB of the frame’s 9.3 GB of text, and the host has 13 GB free.

Full frame distilled prediction

Teacher imitation

Not calibrated prevalence, not ground truth. Human validation pending. Learned from the 10,348 direct Codex labels and 10,348 direct Gemma labels. Candidate is the union of thresholded teacher heads; consensus is their intersection. These outputs are machine_predicted_unvalidated and are not human labels or direct frontier model labels.

metaresearch head score (Codex)0.001
metaresearch head score (Gemma)0.001
Version: codex-gemma-dda1882f352aValidation status: machine_predicted_unvalidated
Candidate categoriesnone
Consensus categoriesnone
DomainCandidate signal: none · Consensus signal: none
Study designCandidate signal: Bench or experimental · Consensus signal: Bench or experimental
GenreCandidate signal: Empirical · Consensus signal: Empirical
Teacher disagreement score0.004
Threshold uncertainty score0.609

Codex and Gemma teacher scores by category

CategoryCodexGemma
Metaresearch0.0010.001
Meta-epidemiology (narrow)0.0000.000
Meta-epidemiology (broad)0.0000.000
Bibliometrics0.0000.000
Science and technology studies0.0000.000
Scholarly communication0.0000.000
Open science0.0010.000
Research integrity0.0000.000
Insufficient payload (model declined to judge)0.0000.000

Machine scores (provisional)

The two teacher heads of the student model, read on this work. A score orders the frame for review; it never asserts a category, and the validation status ships verbatim with every row.

Baseline scores from an immature model (maturity gate not passed, 7 training rounds). Scores rank; they never assert a category.

Opus teacher head0.036
GPT teacher head0.303
Teacher spread0.267 · how far apart the two teachers sit on this one work
Validation statusscore_only:v0-immature-baseline · verbatim from the scoring run: score_only means the number may rank works, and no category label ships from it