MétaCan
Menu
← Back to cohort
Record W2741693251 · doi:10.1158/1538-7445.am2017-4420

Abstract 4420: Elevated glycolytic gene signature in patient-derived neuroendocrine prostate cancer xenograft models and its clinical relevance

2017· article· en· W2741693251 on OpenAlexaff
Stephen Yiu Chuen Choi, Susan Ettinger, Dong Lin, Hui Xue, Robert H. Bell, Fan Mo, Michaël Pollak, Colin C. Collins, Yuzhuo Wang

Bibliographic record

VenueCancer Research · 2017
Typearticle
Languageen
FieldMedicine
TopicProstate Cancer Treatment and Research
Canadian institutionsConcordia UniversityMcGill University
Fundersnot available
KeywordsProstate cancerCancer researchCancerTransdifferentiationMetastasisBiologyAndrogen receptorAndrogen deprivation therapyAdenocarcinomaProstateAngiogenesisMedicineGeneticsCell

Abstract

fetched live from OpenAlex

Abstract Neuroendocrine prostate cancer (NEPC) is a highly aggressive subtype of prostate cancer (PCa) that is becoming increasingly common in the clinic. While the vast majority of PCa presents as androgen-dependent adenocarcinoma, recent uses of increasingly potent therapeutics targeting the androgen receptor signaling axis has resulted in the promotion of NEPC transdifferentiation as a mechanism of treatment resistance. Unfortunately, there is currently no effective treatment option for NEPC. Altered cancer metabolism is now recognized as a hallmark of cancer and a crucial factor for promoting tumour growth and spread. In particular, altered glucose metabolism and the resultant acidification of the tumor microenvironment via increased lactic acid production has been shown to play an important role in multiple cancer-promoting processes, including tissue invasion/metastasis, angiogenesis, and suppression of local anticancer immunity. While increased glycolysis is not generally considered a phenomenon relevant to primary treatment-naive PCa, we have recently demonstrated its relavance to castration-resistant prostate cancer (CRPC) and thus suspect that it is also relevant to the more aggressive NEPC. Our laboratory has also developed a number of unique serially transplantable patient-derived xenograft (PDX) models of NEPC that are histologically highly similar to the donor tissues and retain important genetic and epigenetic features. In particular, we have developed the first spontaneous NEPC transdifferentiation model in the field (LTL331/331R). The gene expression profiles of these NEPC PDX models were compared to that of PCa adenocarcinoma PDX models. To determine whether certain metabolic pathway alterations were specific to NEPC, genes from a number of key metabolic pathways were compiled and overall pathway scores were generated using average expression z-scores. Furthermore, publically available gene expression data from NEPC patient tumors were used to validate our findings. From our analysis, we found that genes in the glycolysis pathway were signficiantlly upregulatied in both our PDX models and also in patient NEPC samples. Of particular interest is the upregulation of genes involved in the production and secretion of lactic acid, such as LDHA and MCT4. As such, our results suggest that elevated glycolysis and production of lactic acid could be a clinically important NEPC phenotype. Furthermore, the inhibition of glycolysis and particularly the inhibition of lactic acid secretion via MCT4 could be a potentially viable therapeutic strategy for NEPC. Citation Format: Stephen Y. Choi, Susan L. Ettinger, Dong Lin, Hui Xue, Robert H. Bell, Fan Mo, Michael Pollak, Colin C. Collins, Yuzhuo Wang. Elevated glycolytic gene signature in patient-derived neuroendocrine prostate cancer xenograft models and its clinical relevance [abstract]. In: Proceedings of the American Association for Cancer Research Annual Meeting 2017; 2017 Apr 1-5; Washington, DC. Philadelphia (PA): AACR; Cancer Res 2017;77(13 Suppl):Abstract nr 4420. doi:10.1158/1538-7445.AM2017-4420

Fetched live from OpenAlex and de-inverted. Abstracts are not stored in this database: the inverted indexes are 8.6 GB of the frame’s 9.3 GB of text, and the host has 13 GB free.

How this classification was reachedexpand

Full frame machine prediction

Teacher imitation

Not calibrated prevalence, not ground truth. Human validation pending. The Gemma side is a direct model label for every work in the frame, read from the title-only record. The Codex side is a classifier learned from the 10,348 direct Codex labels and calibrated to design-weighted sample rates; fields without enough sample support carry no Codex call. Candidate is the union of the two sides; consensus is their intersection. These outputs are machine_predicted_unvalidated and are not human labels.

metaresearch head score (Codex)0.000
metaresearch head score (Gemma)0.000
Version: metacan-v3-hybrid-931329e0061cValidation status: machine_predicted_unvalidated
Candidate categoriesnone
Consensus categoriesnone
DomainCandidate signal: none · Consensus signal: none
Study designCandidate signal: Bench or experimental · Consensus signal: Bench or experimental
GenreCandidate signal: Empirical · Consensus signal: Empirical
Teacher disagreement score0.002
Threshold uncertainty score0.007

Distilled classifier scores by category (both heads)

CategoryCodexGemma
Metaresearch0.0000.000
Meta-epidemiology (narrow)0.0000.000
Meta-epidemiology (broad)0.0000.000
Bibliometrics0.0000.000
Science and technology studies0.0000.000
Scholarly communication0.0000.000
Open science0.0000.000
Research integrity0.0000.001
Insufficient payload (model declined to judge)0.0020.000

Machine scores (provisional)

The two teacher heads of the student model, read on this work. A score orders the frame for review; it never asserts a category, and the validation status ships verbatim with every row.

Baseline scores from an immature model (maturity gate not passed, 7 training rounds). Scores rank; they never assert a category.

Opus teacher head0.144
GPT teacher head0.465
Teacher spread0.321 · how far apart the two teachers sit on this one work
Validation statusscore_only:v0-immature-baseline · verbatim from the scoring run: score_only means the number may rank works, and no category label ships from it

Classification

machine, unvalidated

Machine predicted; a candidate call from one source (direct Gemma or distilled Codex), not a consensus.

The models applied no category: nothing in the taxonomy fit this work.
Study designBench or experimental
Domainnot available
GenreEmpirical

How this classification was reached, model by model and score by score, is at the end of the page under "How this classification was reached".

Quick stats

Citations0
Published2017
Admission routes1
Has abstractyes

Explore more

Same venueCancer Research→Same topicProstate Cancer Treatment and Research→French-language works237,207→