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Record W2743905876 · doi:10.1080/07060661.2017.1355334

Evaluation of <i>Claviceps purpurea</i> isolates on wheat reveals complex virulence and host susceptibility relationships

2017· article· en· W2743905876 on OpenAlexafffundvenueabout
J. G. Menzies, H. W. Klein‐Gebbinck, Anna Gordon, Donal M. O’Sullivan

Bibliographic record

VenueCanadian Journal of Plant Pathology · 2017
Typearticle
Languageen
FieldAgricultural and Biological Sciences
TopicPlant and fungal interactions
Canadian institutionsAgriculture and Agri-Food Canada
FundersAgriculture and Agri-Food CanadaBiotechnology and Biological Sciences Research CouncilCanadian Seed Growers' Association
KeywordsVirulenceBiologyClaviceps purpureaHoneydewGenotypeHost (biology)InoculationPhenotypePathogenBotanyVeterinary medicineMicrobiologyGeneticsHorticultureGene

Abstract

fetched live from OpenAlex

Ergot of cereals, caused by Claviceps purpurea, results in yield loss and downgrading of infested grain because of toxic alkaloids in the sclerotia. Resistant wheat genotypes are known, but their effectiveness against different C. purpurea isolates over geographic regions has not been studied. The objective of this study was to examine the pathogenic variability among isolates of C. purpurea on wheat lines differing in resistance. Under controlled environmental conditions, 41 single spore isolates of C. purpurea were obtained from Canadian and UK collections and inoculated onto a set of wheat genotypes composed of durum wheat lines ‘Melita’, ‘Kyle’ and 9260B-173A, and hexaploid spring wheat lines ‘Cadillac’, ‘Vista’, ‘Kenya Farmer’, ‘Lee’ and HY630. Honeydew production and weight of sclerotia produced per spike were assessed. There were significant differences among the wheat genotypes for overall reactions to the pathogen isolates, and among pathogen isolates for geographic origin and host origin. Twenty virulence phenotypes were identified using the honeydew production data, and 23 virulence phenotypes identified using the sclerotial weight data from the 41 isolates. The existence of different virulence phenotypes indicates that variability in virulence exists in populations of C. purpurea, and knowledge of virulence phenotypes is necessary to effectively breed for resistant commercial lines.

Fetched live from OpenAlex and de-inverted. Abstracts are not stored in this database: the inverted indexes are 8.6 GB of the frame’s 9.3 GB of text, and the host has 13 GB free.

How this classification was reachedexpand

Full frame distilled prediction

Teacher imitation

Not calibrated prevalence, not ground truth. Human validation pending. Learned from the 10,348 direct Codex labels and 10,348 direct Gemma labels. Candidate is the union of thresholded teacher heads; consensus is their intersection. These outputs are machine_predicted_unvalidated and are not human labels or direct frontier model labels.

metaresearch head score (Codex)0.002
metaresearch head score (Gemma)0.001
Version: codex-gemma-dda1882f352aValidation status: machine_predicted_unvalidated
Candidate categoriesnone
Consensus categoriesnone
DomainCandidate signal: none · Consensus signal: none
Study designCandidate signal: Observational · Consensus signal: none
GenreCandidate signal: Empirical · Consensus signal: Empirical
Teacher disagreement score0.659
Threshold uncertainty score0.826

Codex and Gemma teacher scores by category

CategoryCodexGemma
Metaresearch0.0020.001
Meta-epidemiology (narrow)0.0000.000
Meta-epidemiology (broad)0.0000.000
Bibliometrics0.0000.000
Science and technology studies0.0000.000
Scholarly communication0.0000.000
Open science0.0000.000
Research integrity0.0000.000
Insufficient payload (model declined to judge)0.0000.000

Machine scores (provisional)

The two teacher heads of the student model, read on this work. A score orders the frame for review; it never asserts a category, and the validation status ships verbatim with every row.

Baseline scores from an immature model (maturity gate not passed, 7 training rounds). Scores rank; they never assert a category.

Opus teacher head0.129
GPT teacher head0.289
Teacher spread0.160 · how far apart the two teachers sit on this one work
Validation statusscore_only:v0-immature-baseline · verbatim from the scoring run: score_only means the number may rank works, and no category label ships from it

Classification

machine, unvalidated

Machine predicted; a candidate call from one teacher head, not a consensus.

The models applied no category: nothing in the taxonomy fit this work.
Study designObservational
Domainnot available
GenreEmpirical

How this classification was reached, model by model and score by score, is at the end of the page under "How this classification was reached".

Quick stats

Citations16
Published2017
Admission routes4
Has abstractyes

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