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Record W2745072699 · doi:10.1096/fj.201700255r

Hypoxia reduces mature hERG channels through calpain up‐regulation

2017· article· en· W2745072699 on OpenAlexafffund
Shawn M. Lamothe, WonJu Song, Wentao Li, Tonghua Yang, Adrián Baranchuk, Charles H. Graham, Shetuan Zhang

Bibliographic record

VenueThe FASEB Journal · 2017
Typearticle
Languageen
FieldMedicine
TopicCardiac electrophysiology and arrhythmias
Canadian institutionsKingston General HospitalQueen's University
FundersCanadian Institutes of Health Research
KeywordshERGHypoxia (environmental)Potassium channelCalpainSudden deathPharmacologySudden cardiac deathChemistryCell biologyLong QT syndromeBiologyMedicineInternal medicineBiochemistryQT interval

Abstract

fetched live from OpenAlex

Human ether‐a‐go‐go‐related gene ( hERG ) encodes the pore‐forming subunit of the rapidly activating delayed rectifier potassium current (I Kr ) potassium channel, which is important for cardiac repolarization. Impairment of hERG function is the primary cause of acquired long QT syndrome, which predisposes individuals to cardiac arrhythmias and sudden death. Patients with hypoxia due to conditions such as cardiac ischemia or obstructive sleep apnea display increased incidence of cardiac arrhythmias and sudden death. We sought to understand the mechanisms that underlie hypoxia‐associated cardiac arrhythmias. Using cell biology and electro‐physiologic techniques, we found that hypoxic culture of hERG‐expressing human embryonic kidney (HEK) cells and neonatal rat cardiomyocytes reduced hERG current/ I Kr and mature ERG channel expression with a concomitant increase in calpain expression. Calpain was actively released into the extracellular milieu and degraded cell‐surface hERG. In contrast to hERG, the ether‐a‐go‐go (EAG) channel was not reduced by hypoxic culture. By making chimeric channels between hERG and EAG, we identified that hypoxia‐induced calpain degraded hERG by targeting its extracellular S5‐pore linker. The scorpion toxin BeKm‐1, which is known to selectively bind to the S5‐pore linker of hERG, prevented hypoxia‐induced hERG reduction. Our data provide novel information about hypoxia‐mediated hERG dysfunction and may have biological and clinical implications in hypoxia‐associated diseases.—Lamothe, S. M., Song, W., Guo, J., Li, W., Yang, T., Baranchuk, A., Graham, C. H., Zhang, S. Hypoxia reduces mature hERG channels through calpain up‐regulation. FASEB J. 31, 5068–5077 (2017). www.fasebj.org

Fetched live from OpenAlex and de-inverted. Abstracts are not stored in this database: the inverted indexes are 8.6 GB of the frame’s 9.3 GB of text, and the host has 13 GB free.

How this classification was reachedexpand

Full frame distilled prediction

Teacher imitation

Not calibrated prevalence, not ground truth. Human validation pending. Learned from the 10,348 direct Codex labels and 10,348 direct Gemma labels. Candidate is the union of thresholded teacher heads; consensus is their intersection. These outputs are machine_predicted_unvalidated and are not human labels or direct frontier model labels.

metaresearch head score (Codex)0.000
metaresearch head score (Gemma)0.000
Version: codex-gemma-dda1882f352aValidation status: machine_predicted_unvalidated
Candidate categoriesnone
Consensus categoriesnone
DomainCandidate signal: none · Consensus signal: none
Study designCandidate signal: Bench or experimental · Consensus signal: Bench or experimental
GenreCandidate signal: Empirical · Consensus signal: Empirical
Teacher disagreement score0.173
Threshold uncertainty score0.849

Codex and Gemma teacher scores by category

CategoryCodexGemma
Metaresearch0.0000.000
Meta-epidemiology (narrow)0.0000.000
Meta-epidemiology (broad)0.0000.000
Bibliometrics0.0000.000
Science and technology studies0.0010.000
Scholarly communication0.0000.000
Open science0.0000.000
Research integrity0.0000.001
Insufficient payload (model declined to judge)0.0000.000

Machine scores (provisional)

The two teacher heads of the student model, read on this work. A score orders the frame for review; it never asserts a category, and the validation status ships verbatim with every row.

Baseline scores from an immature model (maturity gate not passed, 7 training rounds). Scores rank; they never assert a category.

Opus teacher head0.022
GPT teacher head0.287
Teacher spread0.265 · how far apart the two teachers sit on this one work
Validation statusscore_only:v0-immature-baseline · verbatim from the scoring run: score_only means the number may rank works, and no category label ships from it

Classification

machine, unvalidated

Machine predicted; a candidate call from one teacher head, not a consensus.

The models applied no category: nothing in the taxonomy fit this work.
Study designBench or experimental
Domainnot available
GenreEmpirical

How this classification was reached, model by model and score by score, is at the end of the page under "How this classification was reached".

Quick stats

Citations18
Published2017
Admission routes2
Has abstractyes

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