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Record W2750931630 · doi:10.1002/wsb.803

An alternative minimally invasive technique for genetic sampling of bats: Wing swabs yield species identification

2017· article· en· W2750931630 on OpenAlexafffundabout
Delanie Player, Cori L. Lausen, Beryl Zaitlin, Jori B. Harrison, David Paetkau, Erin Harmston

Bibliographic record

VenueWildlife Society Bulletin · 2017
Typearticle
Languageen
FieldAgricultural and Biological Sciences
TopicBat Biology and Ecology Studies
Canadian institutionsWorld Wildlife Fund CanadaUniversity of CalgaryWildlife Conservation Society Canada
FundersU.S. Geological SurveyShell Canada
KeywordsBiologyWingSampling (signal processing)Identification (biology)DNA barcodingVeterinary medicineInvasive speciesSpecies identificationZoologyEcologyMedicine

Abstract

fetched live from OpenAlex

ABSTRACT Bat species are traditionally identified morphologically, but in some cases, species can be difficult to differentiate. Wing punches (biopsies) of wing or tail membranes are commonly used to collect tissue for DNA analysis, but less invasive techniques are preferable. As such, DNA acquired using buccal and wing swabs or from fecal pellets are increasingly being employed. We compared a dry swabbing technique with the wing biopsy technique for DNA collection. We compared species identification between tissue biopsies and wing swabs collected from bats in Alberta and British Columbia, Canada, between April and November, 2014, and September and October 2015. Species identification was achieved with varying methods of field collection and lab processing. DNA was extracted, sequenced, and compared with reference sequences and field identifications. We concluded that wing swabs are an effective way to identify bat species genetically and far less invasive than biopsy techniques. These methods should be considered for genetically sampling bats, especially during seasons when wounds from biopsy are slow to heal. © 2017 The Wildlife Society.

Fetched live from OpenAlex and de-inverted. Abstracts are not stored in this database: the inverted indexes are 8.6 GB of the frame’s 9.3 GB of text, and the host has 13 GB free.

How this classification was reachedexpand

Full frame distilled prediction

Teacher imitation

Not calibrated prevalence, not ground truth. Human validation pending. Learned from the 10,348 direct Codex labels and 10,348 direct Gemma labels. Candidate is the union of thresholded teacher heads; consensus is their intersection. These outputs are machine_predicted_unvalidated and are not human labels or direct frontier model labels.

metaresearch head score (Codex)0.000
metaresearch head score (Gemma)0.000
Version: codex-gemma-dda1882f352aValidation status: machine_predicted_unvalidated
Candidate categoriesnone
Consensus categoriesnone
DomainCandidate signal: none · Consensus signal: none
Study designCandidate signal: Observational · Consensus signal: none
GenreCandidate signal: Empirical · Consensus signal: Empirical
Teacher disagreement score0.855
Threshold uncertainty score0.804

Codex and Gemma teacher scores by category

CategoryCodexGemma
Metaresearch0.0000.000
Meta-epidemiology (narrow)0.0000.000
Meta-epidemiology (broad)0.0000.000
Bibliometrics0.0000.000
Science and technology studies0.0010.000
Scholarly communication0.0000.000
Open science0.0010.000
Research integrity0.0000.000
Insufficient payload (model declined to judge)0.0000.000

Machine scores (provisional)

The two teacher heads of the student model, read on this work. A score orders the frame for review; it never asserts a category, and the validation status ships verbatim with every row.

Baseline scores from an immature model (maturity gate not passed, 7 training rounds). Scores rank; they never assert a category.

Opus teacher head0.054
GPT teacher head0.272
Teacher spread0.218 · how far apart the two teachers sit on this one work
Validation statusscore_only:v0-immature-baseline · verbatim from the scoring run: score_only means the number may rank works, and no category label ships from it

Classification

machine, unvalidated

Machine predicted; a candidate call from one teacher head, not a consensus.

The models applied no category: nothing in the taxonomy fit this work.
Study designObservational
Domainnot available
GenreEmpirical

How this classification was reached, model by model and score by score, is at the end of the page under "How this classification was reached".

Quick stats

Citations13
Published2017
Admission routes3
Has abstractyes

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