MétaCan
Menu
Back to cohort
Record W2758292515

Hepatitis B Virus Mutations and Chronic Hepatitis B Clinical Outcomes During Pregnancy and Post-Partum Follow-up

2015· article· en· W2758292515 on OpenAlexaffvenue
Tong Wang

Bibliographic record

VenueJournal of undergraduate research in Alberta · 2015
Typearticle
Languageen
FieldMedicine
TopicHepatitis B Virus Studies
Canadian institutionsUniversity of Calgary
Fundersnot available
KeywordsHepatitis B virusMedicineHBeAgPregnancyViremiaVirologyViral loadHepatitis BGenotypeImmunologyLiver diseaseVirusInternal medicineBiologyHBsAgGeneGenetics
DOInot available

Abstract

fetched live from OpenAlex

Chronic hepatitis B (CHB) is a dynamic disease, that may be affected by host immunological changes in pregnancy. Certain HBV genotypes (i.e., C vs B) and HBV core (C), basal core promoter (BCP) and surface (S) variants are associated with increased liver disease risk, and rarely linked to vaccine failure due to mother-to-child transmission (MTCT) of vaccine escape mutants (VEM). In highly viremic mothers guidelines recommend consideration of nucleos/tide analogs (NA) therapy targeting the HBV polymerase (P) to reduce MTCT risk. AIM : To follow untreated and NA-treated CHB carriers during pregnancy until ~ 6 months postpartum to assess HBV viral load, liver enzymes and HBV eAg (HBeAg) status, and to evaluate for changes in the HBV genome. METHODS: In this prospective study, demographic and clinical data were collected from 21 women recruited in the 2 nd trimester (one with 2 pregnancies), and during post-partum follow-up. In plasma collected during pregnancy (20/21), and post-partum (11/21), the HBV pre-S/S overlapping P region in all, and the HBV pre-C/C gene (9/21 to date) were PCR amplified, amplicons cloned and ~15 clones/plasma sample sequenced and analyzed with MEGA V5.0. Maternal clinical outcomes assessed included changes in HBV DNA, quantitative HBV surface antigen (qHBsAg) titres, ALT and HBeAg serconversion. RESULTS: In 21 patients (median age 31 y, 62% Asian with genotype B or C, 41% HBeAg+, 23% (5/21) were treated with TDF to reduce maternal viremia (median baseline HBV DNA 8.5 log IU/ml). In 16 untreated patients, the median baseline vs postpartum ALT increased (19.5 [range 6-43] vs 24.5 [range 7- 64], P<0.01) albeit with no significant change in HBV DNA (2.7 vs 2.4 log10 IU/ml). All had normal post-partum liver stiffness measurement (LSM) by transient elastography (median LSM 4.7 kpa, range 2.8-6.1) and none had HBeAg loss. Clonal sequencing analysis of the HBV preS/S/overlapping P region showed that patients often carried minor variants associated with immune escape (N=12) and liver disease (N=8), as well as NA resistance (N=4). Clonal sequencing analysis of the HBV pre C/C region in 9 patients to date showed that patients often carried pre C variants (N=7), only a few had carried BCP variants (N=1). SUMMARY : CHB carriers followed during pregnancy and post-partum often experience mild ALT elevations from baseline and carry minor HBV variants at residues associated with vaccine escape, liver disease and NA resistance. Analysis of the pre C/C region to date showed variants associated with HBeAg(-) CHB and increased risk of liver disease.

Fetched live from OpenAlex and de-inverted. Abstracts are not stored in this database: the inverted indexes are 8.6 GB of the frame’s 9.3 GB of text, and the host has 13 GB free.

How this classification was reachedexpand

Full frame distilled prediction

Teacher imitation

Not calibrated prevalence, not ground truth. Human validation pending. Learned from the 10,348 direct Codex labels and 10,348 direct Gemma labels. Candidate is the union of thresholded teacher heads; consensus is their intersection. These outputs are machine_predicted_unvalidated and are not human labels or direct frontier model labels.

metaresearch head score (Codex)0.001
metaresearch head score (Gemma)0.006
Version: codex-gemma-dda1882f352aValidation status: machine_predicted_unvalidated
Candidate categoriesnone
Consensus categoriesnone
DomainCandidate signal: none · Consensus signal: none
Study designCandidate signal: Observational · Consensus signal: Observational
GenreCandidate signal: Empirical · Consensus signal: Empirical
Teacher disagreement score0.219
Threshold uncertainty score0.951

Codex and Gemma teacher scores by category

CategoryCodexGemma
Metaresearch0.0010.006
Meta-epidemiology (narrow)0.0000.000
Meta-epidemiology (broad)0.0010.000
Bibliometrics0.0010.000
Science and technology studies0.0000.001
Scholarly communication0.0000.000
Open science0.0000.000
Research integrity0.0000.001
Insufficient payload (model declined to judge)0.0000.000

Machine scores (provisional)

The two teacher heads of the student model, read on this work. A score orders the frame for review; it never asserts a category, and the validation status ships verbatim with every row.

Baseline scores from an immature model (maturity gate not passed, 7 training rounds). Scores rank; they never assert a category.

Opus teacher head0.106
GPT teacher head0.413
Teacher spread0.307 · how far apart the two teachers sit on this one work
Validation statusscore_only:v0-immature-baseline · verbatim from the scoring run: score_only means the number may rank works, and no category label ships from it

Classification

machine, unvalidated

Machine predicted; a candidate call from one teacher head, not a consensus.

The models applied no category: nothing in the taxonomy fit this work.
Study designObservational
Domainnot available
GenreEmpirical

How this classification was reached, model by model and score by score, is at the end of the page under "How this classification was reached".

Quick stats

Citations0
Published2015
Admission routes2
Has abstractyes

Explore more

Same venueJournal of undergraduate research in AlbertaSame topicHepatitis B Virus StudiesFrench-language works237,207