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Record W2763667429 · doi:10.24870/cjb.2017-a153

Generation and usage of a genetically engineered Virophage with RTase for the treatment of Ebola

2017· article· en· W2763667429 on OpenAlexvenueno aff
Srinivas Sankaranarayanan, L. Ansel Vishal

Bibliographic record

VenueCanadian Journal of Biotechnology · 2017
Typearticle
Languageen
FieldMedicine
TopicViral Infections and Outbreaks Research
Canadian institutionsnot available
Fundersnot available
KeywordsGenetically engineeredGenetically modified organismEbola virusComputer scienceBiologyVirologyGeneticsGeneOutbreak

Abstract

fetched live from OpenAlex

Ebola virus is a deadly virus that causes Hemorrhagic fever and death in infected individuals. There has been no proper treatment agent for this deadly virus. This novel approach involves treatment and curing of Ebola viral infection by using a genetically engineered Virus (Virophage) that would inhibit its propagation inside the cell after its entry by competing with its expression as well as replication and by reverse transcribing the genetic material of Ebola. The main idea involves the generation of a new Virophage with RTase in it but lacking the RNA dependent RNA polymerase along with VP24 and VP30 genes such that it is replication defective and competes with the actual Ebola's RNA dependent RNA polymerase resulting in inhibition of its replication. Since the virophage is spliced with the RTase gene, the replication of the virophage's negative sense RNA using the Ebola's polymerase would cause the expression of the RTase which would non-specifically reverse transcribe all the available RNAs (both positive and negative sense ssRNA) in the cytosol resulting in the production of the complementary DNA of Ebola as well as the available virophage. Since the Ebola's polymerase is RNA dependent, it couldn't produce RNA from the reverse transcribed DNA and there is lesser possibility of the cDNA of Ebola to be integrated into the host's chromosome. This is because the filoviridae family lacks the integrase enzyme unlike the Retroviridae. As a result, the Ebola's replication as well as expression in the host is inhibited. Experimental design STEP1: Generation of a virophage that has its genome similar to that of the actual Ebola having RTase but lacking genes of VP24, 35 so as to elicit immunity simultaneously during the inhibition of the virus. STEP2: In-vitro testing for inhibition of ebola's life cycle. STEP3: In-vivo testing in rats for effective inhibition of Ebola and development of resistance to it. Supporting Details There has been a report of Ebola survivor, a 48 year old patient (yet Ebola RNA found after 565 days of recovery from EBV using RT PCR in the patient's semen, although no active viral particles were observed) with previous HIV infection [5].

Fetched live from OpenAlex and de-inverted. Abstracts are not stored in this database: the inverted indexes are 8.6 GB of the frame’s 9.3 GB of text, and the host has 13 GB free.

How this classification was reachedexpand

Full frame distilled prediction

Teacher imitation

Not calibrated prevalence, not ground truth. Human validation pending. Learned from the 10,348 direct Codex labels and 10,348 direct Gemma labels. Candidate is the union of thresholded teacher heads; consensus is their intersection. These outputs are machine_predicted_unvalidated and are not human labels or direct frontier model labels.

metaresearch head score (Codex)0.000
metaresearch head score (Gemma)0.000
Version: codex-gemma-dda1882f352aValidation status: machine_predicted_unvalidated
Candidate categoriesnone
Consensus categoriesnone
DomainCandidate signal: none · Consensus signal: none
Study designCandidate signal: Bench or experimental · Consensus signal: Bench or experimental
GenreCandidate signal: Empirical · Consensus signal: Empirical
Teacher disagreement score0.281
Threshold uncertainty score0.500

Codex and Gemma teacher scores by category

CategoryCodexGemma
Metaresearch0.0000.000
Meta-epidemiology (narrow)0.0000.000
Meta-epidemiology (broad)0.0000.000
Bibliometrics0.0000.000
Science and technology studies0.0000.000
Scholarly communication0.0000.000
Open science0.0000.000
Research integrity0.0000.000
Insufficient payload (model declined to judge)0.0000.000

Machine scores (provisional)

The two teacher heads of the student model, read on this work. A score orders the frame for review; it never asserts a category, and the validation status ships verbatim with every row.

Baseline scores from an immature model (maturity gate not passed, 7 training rounds). Scores rank; they never assert a category.

Opus teacher head0.041
GPT teacher head0.303
Teacher spread0.263 · how far apart the two teachers sit on this one work
Validation statusscore_only:v0-immature-baseline · verbatim from the scoring run: score_only means the number may rank works, and no category label ships from it

Classification

machine, unvalidated

Machine predicted; a candidate call from one teacher head, not a consensus.

The models applied no category: nothing in the taxonomy fit this work.
Study designBench or experimental
Domainnot available
GenreEmpirical

How this classification was reached, model by model and score by score, is at the end of the page under "How this classification was reached".

Quick stats

Citations0
Published2017
Admission routes1
Has abstractyes

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